Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm11843-201ENSMUST00000118984 425 ntBASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm2318-201ENSMUST00000119623 639 ntBASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm2005-201ENSMUST00000120759 542 ntBASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm2343-201ENSMUST00000161177 1042 ntBASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm14819-202ENSMUST00000169396 639 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm10487-201ENSMUST00000177566 639 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm7438-201ENSMUST00000177664 639 ntBASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm14632-202ENSMUST00000177917 639 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm7408-201ENSMUST00000178014 639 ntBASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm7386-201ENSMUST00000178020 639 ntBASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm10058-202ENSMUST00000178152 639 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm3657-201ENSMUST00000178170 639 ntBASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm7415-201ENSMUST00000178205 639 ntBASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm7398-201ENSMUST00000178589 639 ntBASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm10096-201ENSMUST00000178672 639 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm7391-201ENSMUST00000178680 639 ntBASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm10230-202ENSMUST00000178745 639 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm2092-201ENSMUST00000178887 639 ntBASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm10147-202ENSMUST00000178966 639 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm7375-201ENSMUST00000179232 639 ntBASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm2759-201ENSMUST00000179938 639 ntBASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm3681-201ENSMUST00000179940 639 ntBASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm36985-201ENSMUST00000195595 379 ntBASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm43489-201ENSMUST00000196810 993 ntBASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm43991-201ENSMUST00000203751 274 ntBASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm43967-201ENSMUST00000203787 301 ntBASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm45078-201ENSMUST00000205343 546 ntBASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm45048-201ENSMUST00000207058 429 ntBASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm19232-201ENSMUST00000211621 652 ntBASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm22806-201ENSMUST00000082738 136 ntBASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm23455-201ENSMUST00000083331 100 ntBASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Olfr781-202ENSMUST00000204108 1304 ntAPPRIS P1 TSL 3 BASIC1.91□□□□□ -2.1
Trav6d-4Q5R1I0 Gm6207-201ENSMUST00000120075 1386 ntBASIC1.9□□□□□ -2.11
Trav6d-4Q5R1I0 Gm6228-201ENSMUST00000178856 1386 ntBASIC1.9□□□□□ -2.11
Trav6d-4Q5R1I0 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Trav6d-4Q5R1I0 Gm23551-201ENSMUST00000116852 121 ntBASIC1.9□□□□□ -2.11
Trav6d-4Q5R1I0 Gm14579-201ENSMUST00000117068 283 ntBASIC1.9□□□□□ -2.11
Trav6d-4Q5R1I0 Gm11356-201ENSMUST00000118974 192 ntBASIC1.9□□□□□ -2.11
Trav6d-4Q5R1I0 Mup-ps21-201ENSMUST00000119998 448 ntBASIC1.9□□□□□ -2.11
Trav6d-4Q5R1I0 Gm14841-201ENSMUST00000121067 758 ntBASIC1.9□□□□□ -2.11
Trav6d-4Q5R1I0 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC1.9□□□□□ -2.11
Trav6d-4Q5R1I0 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC1.9□□□□□ -2.11
Trav6d-4Q5R1I0 Gm12956-201ENSMUST00000122184 414 ntBASIC1.9□□□□□ -2.11
Trav6d-4Q5R1I0 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.9□□□□□ -2.11
Trav6d-4Q5R1I0 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC1.9□□□□□ -2.11
Trav6d-4Q5R1I0 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC1.9□□□□□ -2.11
Trav6d-4Q5R1I0 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
Trav6d-4Q5R1I0 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC1.9□□□□□ -2.11
Trav6d-4Q5R1I0 Smr2-202ENSMUST00000196070 813 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
Trav6d-4Q5R1I0 Gm43626-201ENSMUST00000198575 162 ntBASIC1.9□□□□□ -2.11
Trav6d-4Q5R1I0 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC1.9□□□□□ -2.11
Trav6d-4Q5R1I0 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
Trav6d-4Q5R1I0 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC1.9□□□□□ -2.11
Trav6d-4Q5R1I0 Gm6562-201ENSMUST00000221903 464 ntBASIC1.9□□□□□ -2.11
Trav6d-4Q5R1I0 AC144819.1-201ENSMUST00000227015 620 ntBASIC1.9□□□□□ -2.11
Trav6d-4Q5R1I0 AC129017.1-201ENSMUST00000228363 270 ntBASIC1.9□□□□□ -2.11
Trav6d-4Q5R1I0 Gm23447-201ENSMUST00000082798 163 ntBASIC1.9□□□□□ -2.11
Trav6d-4Q5R1I0 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
Trav6d-4Q5R1I0 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC1.89□□□□□ -2.11
Trav6d-4Q5R1I0 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC1.89□□□□□ -2.11
Trav6d-4Q5R1I0 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
Trav6d-4Q5R1I0 Zcchc9-ps-201ENSMUST00000117884 786 ntBASIC1.89□□□□□ -2.11
Trav6d-4Q5R1I0 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC1.89□□□□□ -2.11
Trav6d-4Q5R1I0 Gm14652-201ENSMUST00000118479 235 ntBASIC1.89□□□□□ -2.11
Trav6d-4Q5R1I0 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC1.89□□□□□ -2.11
Trav6d-4Q5R1I0 Gm11483-201ENSMUST00000119839 247 ntBASIC1.89□□□□□ -2.11
Trav6d-4Q5R1I0 Gm16561-201ENSMUST00000163001 192 ntBASIC1.89□□□□□ -2.11
Trav6d-4Q5R1I0 Gm3104-201ENSMUST00000171004 473 ntBASIC1.89□□□□□ -2.11
Trav6d-4Q5R1I0 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC1.89□□□□□ -2.11
Trav6d-4Q5R1I0 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC1.89□□□□□ -2.11
Trav6d-4Q5R1I0 Gm7909-201ENSMUST00000182688 614 ntBASIC1.89□□□□□ -2.11
Trav6d-4Q5R1I0 Gm27477-201ENSMUST00000184649 143 ntBASIC1.89□□□□□ -2.11
Trav6d-4Q5R1I0 Trbv27-201ENSMUST00000193711 277 ntBASIC1.89□□□□□ -2.11
Trav6d-4Q5R1I0 Mir378a-201ENSMUST00000198300 66 ntBASIC1.89□□□□□ -2.11
Trav6d-4Q5R1I0 Gm43587-201ENSMUST00000199590 204 ntBASIC1.89□□□□□ -2.11
Trav6d-4Q5R1I0 Gm15235-201ENSMUST00000200572 194 ntBASIC1.89□□□□□ -2.11
Trav6d-4Q5R1I0 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC1.89□□□□□ -2.11
Trav6d-4Q5R1I0 Crs-ps-201ENSMUST00000203723 760 ntBASIC1.89□□□□□ -2.11
Trav6d-4Q5R1I0 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
Trav6d-4Q5R1I0 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC1.89□□□□□ -2.11
Trav6d-4Q5R1I0 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC1.89□□□□□ -2.11
Trav6d-4Q5R1I0 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC1.89□□□□□ -2.11
Trav6d-4Q5R1I0 AL662807.1-201ENSMUST00000224183 126 ntBASIC1.89□□□□□ -2.11
Trav6d-4Q5R1I0 AC170086.1-201ENSMUST00000225190 497 ntBASIC1.89□□□□□ -2.11
Trav6d-4Q5R1I0 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Trav6d-4Q5R1I0 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms