Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 Gm26418-201ENSMUST00000104275 137 ntBASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 Gm14811-201ENSMUST00000117070 117 ntBASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 Gm12640-201ENSMUST00000120097 310 ntBASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 Mup-ps13-201ENSMUST00000120662 545 ntBASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 Mup-ps1-201ENSMUST00000120720 544 ntBASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 Gm5963-201ENSMUST00000143451 236 ntBASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 Gm6265-201ENSMUST00000149263 231 ntBASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 Gm22034-201ENSMUST00000157283 134 ntBASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 Gm27942-201ENSMUST00000184669 101 ntBASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 Ighv1-41-201ENSMUST00000194414 329 ntBASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 Gm43991-201ENSMUST00000203751 274 ntBASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 Gm45687-201ENSMUST00000209454 155 ntBASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 Gm7119-201ENSMUST00000221345 695 ntBASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 AC167669.3-201ENSMUST00000224720 393 ntBASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 AC124569.1-201ENSMUST00000225932 101 ntBASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 AC115291.2-201ENSMUST00000228335 437 ntBASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 Gm26437-201ENSMUST00000082595 105 ntBASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 Mir132-201ENSMUST00000083603 66 ntBASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trav3-3Q5R1C3 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Gm37999-201ENSMUST00000195178 1809 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Gm16436-201ENSMUST00000121510 1607 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Gm14879-201ENSMUST00000117308 507 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Gm11268-201ENSMUST00000118347 267 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Gm14599-201ENSMUST00000120469 474 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Gm14581-201ENSMUST00000121726 198 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Gm1989-201ENSMUST00000126244 636 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Gm16533-201ENSMUST00000140035 228 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Gm26099-201ENSMUST00000157248 109 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Gm17061-201ENSMUST00000163167 499 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Gm24757-201ENSMUST00000176987 371 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Mir8096-201ENSMUST00000184526 127 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Mir6372-201ENSMUST00000185114 109 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Mir6943-201ENSMUST00000185186 66 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Trav12-4-201ENSMUST00000200663 271 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Gm45038-201ENSMUST00000207537 3838 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Gm45522-201ENSMUST00000210784 166 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Gm39147-201ENSMUST00000211376 465 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 AC124729.1-201ENSMUST00000225327 976 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Gm5265-201ENSMUST00000076828 342 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Gm6030-201ENSMUST00000078768 402 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Snord35b-201ENSMUST00000082833 87 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Trav3-3Q5R1C3 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm40020-201ENSMUST00000215677 1635 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Samt2-201ENSMUST00000101137 923 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm11913-201ENSMUST00000119094 336 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm13239-201ENSMUST00000119920 637 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm14238-201ENSMUST00000120227 323 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm15461-201ENSMUST00000143488 235 ntTSL 3 BASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm23599-201ENSMUST00000157261 251 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm27592-201ENSMUST00000157729 126 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm24552-201ENSMUST00000158646 103 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm22174-201ENSMUST00000175050 125 ntBASIC2.28□□□□□ -2.04
Trav3-3Q5R1C3 Gm22692-201ENSMUST00000175055 125 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms