Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Upf3bQ3ULL6 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Upf3bQ3ULL6 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Upf3bQ3ULL6 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Upf3bQ3ULL6 Gm37236-201ENSMUST00000193670 3249 ntBASIC2.89□□□□□ -1.95
Upf3bQ3ULL6 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.89□□□□□ -1.95
Upf3bQ3ULL6 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
Upf3bQ3ULL6 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.89□□□□□ -1.95
Upf3bQ3ULL6 Mir599-201ENSMUST00000102378 88 ntBASIC2.89□□□□□ -1.95
Upf3bQ3ULL6 Gm23128-201ENSMUST00000104257 132 ntBASIC2.89□□□□□ -1.95
Upf3bQ3ULL6 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Upf3bQ3ULL6 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Upf3bQ3ULL6 Gm25528-201ENSMUST00000180264 132 ntBASIC2.89□□□□□ -1.95
Upf3bQ3ULL6 Gm6113-201ENSMUST00000180319 639 ntBASIC2.89□□□□□ -1.95
Upf3bQ3ULL6 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC2.89□□□□□ -1.95
Upf3bQ3ULL6 Gm10925-201ENSMUST00000189941 678 ntBASIC2.89□□□□□ -1.95
Upf3bQ3ULL6 Gm23128-202ENSMUST00000196578 133 ntBASIC2.89□□□□□ -1.95
Upf3bQ3ULL6 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Upf3bQ3ULL6 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC2.89□□□□□ -1.95
Upf3bQ3ULL6 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC2.89□□□□□ -1.95
Upf3bQ3ULL6 Gm42896-201ENSMUST00000201249 1113 ntBASIC2.89□□□□□ -1.95
Upf3bQ3ULL6 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Upf3bQ3ULL6 Gm19233-201ENSMUST00000219772 936 ntBASIC2.89□□□□□ -1.95
Upf3bQ3ULL6 AC160114.1-201ENSMUST00000221930 365 ntBASIC2.89□□□□□ -1.95
Upf3bQ3ULL6 AC144628.1-201ENSMUST00000227943 466 ntBASIC2.89□□□□□ -1.95
Upf3bQ3ULL6 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Upf3bQ3ULL6 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.89□□□□□ -1.95
Upf3bQ3ULL6 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.89□□□□□ -1.95
Upf3bQ3ULL6 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.89□□□□□ -1.95
Upf3bQ3ULL6 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Gm23431-201ENSMUST00000104006 107 ntBASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Gm23747-201ENSMUST00000104228 131 ntBASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Mup-ps13-201ENSMUST00000120662 545 ntBASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Gm8338-201ENSMUST00000163928 363 ntBASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Gm22111-201ENSMUST00000178010 79 ntBASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Gm23687-201ENSMUST00000178664 79 ntBASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Gm24566-201ENSMUST00000179286 79 ntBASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Gm23305-201ENSMUST00000179342 79 ntBASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Gm23860-201ENSMUST00000179446 132 ntBASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Gm26389-201ENSMUST00000179819 79 ntBASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Gm22130-201ENSMUST00000179979 79 ntBASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Gm22393-201ENSMUST00000180153 79 ntBASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Gm25085-201ENSMUST00000180298 79 ntBASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Gm27999-201ENSMUST00000183539 193 ntBASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Gm7443-201ENSMUST00000206355 378 ntBASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Gm18855-201ENSMUST00000206689 570 ntBASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Gm18039-201ENSMUST00000217816 728 ntBASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Gm17872-201ENSMUST00000222550 532 ntBASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Gm26439-201ENSMUST00000082592 106 ntBASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
Upf3bQ3ULL6 Gm26143-201ENSMUST00000104480 108 ntBASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 Gm11429-201ENSMUST00000119089 144 ntBASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 Gm7327-201ENSMUST00000120925 652 ntBASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 Gm14840-201ENSMUST00000122135 594 ntBASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 Gm24958-201ENSMUST00000158009 97 ntBASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 Gm25066-201ENSMUST00000158145 123 ntBASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 Gm22538-201ENSMUST00000158169 299 ntBASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 Gm25902-201ENSMUST00000158493 318 ntBASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 Gm17655-201ENSMUST00000167969 255 ntBASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 Gm29513-201ENSMUST00000185741 202 ntBASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 Gm17935-201ENSMUST00000196649 772 ntBASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 Gm44399-201ENSMUST00000205043 226 ntBASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 Gm6012-201ENSMUST00000210821 730 ntBASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 Gm10088-201ENSMUST00000074116 423 ntBASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 Olfr1193-201ENSMUST00000081697 957 ntBASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 Gm22293-201ENSMUST00000083314 109 ntBASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 Gm23264-201ENSMUST00000083372 107 ntBASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 Gm5583-201ENSMUST00000174328 1519 ntBASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 AC154552.6-201ENSMUST00000221365 1342 ntBASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Upf3bQ3ULL6 AC154481.2-201ENSMUST00000222526 3175 ntBASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 Gm14677-201ENSMUST00000117866 486 ntBASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 Gm16017-201ENSMUST00000119834 208 ntBASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC2.86□□□□□ -1.95
Upf3bQ3ULL6 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC2.86□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 112.7 ms