Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Rnf180Q3U827 Gm44435-201ENSMUST00000204379 4119 ntBASIC4.82□□□□□ -1.64
Rnf180Q3U827 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Rnf180Q3U827 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC4.82□□□□□ -1.64
Rnf180Q3U827 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.82□□□□□ -1.64
Rnf180Q3U827 Olfr736-203ENSMUST00000213755 2338 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Rnf180Q3U827 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Rnf180Q3U827 Mir292-201ENSMUST00000104847 82 ntBASIC4.82□□□□□ -1.64
Rnf180Q3U827 Gm12902-201ENSMUST00000118389 322 ntBASIC4.82□□□□□ -1.64
Rnf180Q3U827 Gm11704-201ENSMUST00000120031 214 ntBASIC4.82□□□□□ -1.64
Rnf180Q3U827 Gm11606-201ENSMUST00000120706 617 ntBASIC4.82□□□□□ -1.64
Rnf180Q3U827 Gm7308-201ENSMUST00000121087 447 ntBASIC4.82□□□□□ -1.64
Rnf180Q3U827 Gm23496-201ENSMUST00000157741 248 ntBASIC4.82□□□□□ -1.64
Rnf180Q3U827 Gm26402-201ENSMUST00000158499 113 ntBASIC4.82□□□□□ -1.64
Rnf180Q3U827 Gm16566-201ENSMUST00000160387 910 ntBASIC4.82□□□□□ -1.64
Rnf180Q3U827 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC4.82□□□□□ -1.64
Rnf180Q3U827 Mir5098-201ENSMUST00000175320 82 ntBASIC4.82□□□□□ -1.64
Rnf180Q3U827 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Rnf180Q3U827 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC4.82□□□□□ -1.64
Rnf180Q3U827 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC4.82□□□□□ -1.64
Rnf180Q3U827 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC4.82□□□□□ -1.64
Rnf180Q3U827 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Rnf180Q3U827 Gm37523-201ENSMUST00000194901 412 ntBASIC4.82□□□□□ -1.64
Rnf180Q3U827 Gm45200-201ENSMUST00000207434 919 ntBASIC4.82□□□□□ -1.64
Rnf180Q3U827 Gm9068-201ENSMUST00000217393 455 ntBASIC4.82□□□□□ -1.64
Rnf180Q3U827 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Rnf180Q3U827 AC115750.1-201ENSMUST00000220441 567 ntBASIC4.82□□□□□ -1.64
Rnf180Q3U827 AC104832.1-201ENSMUST00000222938 550 ntBASIC4.82□□□□□ -1.64
Rnf180Q3U827 AC115291.1-201ENSMUST00000226803 258 ntBASIC4.82□□□□□ -1.64
Rnf180Q3U827 AC131029.2-202ENSMUST00000228430 496 ntBASIC4.82□□□□□ -1.64
Rnf180Q3U827 Gm25079-201ENSMUST00000082529 203 ntBASIC4.82□□□□□ -1.64
Rnf180Q3U827 Gm22508-201ENSMUST00000082772 110 ntBASIC4.82□□□□□ -1.64
Rnf180Q3U827 Gm24533-201ENSMUST00000083138 196 ntBASIC4.82□□□□□ -1.64
Rnf180Q3U827 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Rnf180Q3U827 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Rnf180Q3U827 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Rnf180Q3U827 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
Rnf180Q3U827 AC116797.2-201ENSMUST00000224763 4221 ntBASIC4.82□□□□□ -1.64
Rnf180Q3U827 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Rnf180Q3U827 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
Rnf180Q3U827 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.81□□□□□ -1.64
Rnf180Q3U827 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Rnf180Q3U827 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Rnf180Q3U827 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Rnf180Q3U827 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Rnf180Q3U827 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Rnf180Q3U827 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.81□□□□□ -1.64
Rnf180Q3U827 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Rnf180Q3U827 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Rnf180Q3U827 Gm23744-201ENSMUST00000104231 149 ntBASIC4.81□□□□□ -1.64
Rnf180Q3U827 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Rnf180Q3U827 Gm6274-201ENSMUST00000118173 797 ntBASIC4.81□□□□□ -1.64
Rnf180Q3U827 Gm14359-201ENSMUST00000118883 424 ntBASIC4.81□□□□□ -1.64
Rnf180Q3U827 Gm12087-201ENSMUST00000121878 258 ntBASIC4.81□□□□□ -1.64
Rnf180Q3U827 Gm9498-201ENSMUST00000140849 291 ntBASIC4.81□□□□□ -1.64
Rnf180Q3U827 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC4.81□□□□□ -1.64
Rnf180Q3U827 Gm24060-201ENSMUST00000157494 95 ntBASIC4.81□□□□□ -1.64
Rnf180Q3U827 Gm22597-201ENSMUST00000157602 80 ntBASIC4.81□□□□□ -1.64
Rnf180Q3U827 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC4.81□□□□□ -1.64
Rnf180Q3U827 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC4.81□□□□□ -1.64
Rnf180Q3U827 Gm26983-201ENSMUST00000182051 388 ntBASIC4.81□□□□□ -1.64
Rnf180Q3U827 Gm28724-201ENSMUST00000186149 625 ntBASIC4.81□□□□□ -1.64
Rnf180Q3U827 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC4.81□□□□□ -1.64
Rnf180Q3U827 Gm44256-201ENSMUST00000203304 335 ntBASIC4.81□□□□□ -1.64
Rnf180Q3U827 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC4.81□□□□□ -1.64
Rnf180Q3U827 AC154296.2-201ENSMUST00000214696 545 ntBASIC4.81□□□□□ -1.64
Rnf180Q3U827 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.81□□□□□ -1.64
Rnf180Q3U827 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC4.81□□□□□ -1.64
Rnf180Q3U827 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Rnf180Q3U827 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Rnf180Q3U827 Gm20172-201ENSMUST00000193138 1551 ntBASIC4.81□□□□□ -1.64
Rnf180Q3U827 Gm44679-201ENSMUST00000207202 2908 ntBASIC4.81□□□□□ -1.64
Rnf180Q3U827 Gm42801-201ENSMUST00000202562 2865 ntBASIC4.81□□□□□ -1.64
Rnf180Q3U827 Gm37831-201ENSMUST00000191685 1787 ntBASIC4.81□□□□□ -1.64
Rnf180Q3U827 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Rnf180Q3U827 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Rnf180Q3U827 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Rnf180Q3U827 Gm45483-201ENSMUST00000209845 1682 ntBASIC4.8□□□□□ -1.64
Rnf180Q3U827 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Rnf180Q3U827 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Rnf180Q3U827 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC4.8□□□□□ -1.64
Rnf180Q3U827 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Rnf180Q3U827 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Rnf180Q3U827 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Rnf180Q3U827 Mir667-201ENSMUST00000102441 92 ntBASIC4.8□□□□□ -1.64
Rnf180Q3U827 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Rnf180Q3U827 Gm13331-201ENSMUST00000117500 448 ntBASIC4.8□□□□□ -1.64
Rnf180Q3U827 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC4.8□□□□□ -1.64
Rnf180Q3U827 Gm15034-201ENSMUST00000120043 349 ntBASIC4.8□□□□□ -1.64
Rnf180Q3U827 Gm14428-201ENSMUST00000120408 822 ntBASIC4.8□□□□□ -1.64
Rnf180Q3U827 Gm10059-201ENSMUST00000131139 171 ntBASIC4.8□□□□□ -1.64
Rnf180Q3U827 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Rnf180Q3U827 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC4.8□□□□□ -1.64
Rnf180Q3U827 Gm23124-201ENSMUST00000157650 107 ntBASIC4.8□□□□□ -1.64
Rnf180Q3U827 Gm24402-201ENSMUST00000157873 91 ntBASIC4.8□□□□□ -1.64
Rnf180Q3U827 Gm22434-201ENSMUST00000158549 122 ntBASIC4.8□□□□□ -1.64
Rnf180Q3U827 Gm24550-201ENSMUST00000158648 279 ntBASIC4.8□□□□□ -1.64
Rnf180Q3U827 Gm23144-201ENSMUST00000180226 107 ntBASIC4.8□□□□□ -1.64
Rnf180Q3U827 Gm27028-201ENSMUST00000182303 399 ntBASIC4.8□□□□□ -1.64
Rnf180Q3U827 Gm37404-201ENSMUST00000195726 359 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms