Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm6374-201ENSMUST00000159051 788 ntBASIC2.16□□□□□ -2.06
Col6a3E9PWQ3 Gm17194-201ENSMUST00000164610 348 ntBASIC2.16□□□□□ -2.06
Col6a3E9PWQ3 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC2.16□□□□□ -2.06
Col6a3E9PWQ3 CR974485.1-201ENSMUST00000222408 402 ntBASIC2.16□□□□□ -2.06
Col6a3E9PWQ3 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.16□□□□□ -2.06
Col6a3E9PWQ3 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.06
Col6a3E9PWQ3 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.15□□□□□ -2.06
Col6a3E9PWQ3 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC2.15□□□□□ -2.06
Col6a3E9PWQ3 Gm23600-201ENSMUST00000157260 71 ntBASIC2.15□□□□□ -2.06
Col6a3E9PWQ3 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
Col6a3E9PWQ3 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
Col6a3E9PWQ3 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.15□□□□□ -2.07
Col6a3E9PWQ3 Gm2544-201ENSMUST00000222702 756 ntBASIC2.15□□□□□ -2.07
Col6a3E9PWQ3 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Col6a3E9PWQ3 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.15□□□□□ -2.07
Col6a3E9PWQ3 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Col6a3E9PWQ3 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Col6a3E9PWQ3 Gm19080-201ENSMUST00000196082 550 ntBASIC2.15□□□□□ -2.07
Col6a3E9PWQ3 Gm43892-201ENSMUST00000204373 265 ntBASIC2.15□□□□□ -2.07
Col6a3E9PWQ3 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
Col6a3E9PWQ3 Gm16328-201ENSMUST00000126985 196 ntBASIC2.14□□□□□ -2.07
Col6a3E9PWQ3 Gm24664-201ENSMUST00000158939 100 ntBASIC2.14□□□□□ -2.07
Col6a3E9PWQ3 Gm17159-201ENSMUST00000169043 482 ntBASIC2.14□□□□□ -2.07
Col6a3E9PWQ3 Gm29356-201ENSMUST00000186935 373 ntBASIC2.14□□□□□ -2.07
Col6a3E9PWQ3 Gm19123-201ENSMUST00000190716 651 ntBASIC2.14□□□□□ -2.07
Col6a3E9PWQ3 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Col6a3E9PWQ3 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Col6a3E9PWQ3 Gm15090-201ENSMUST00000118787 1196 ntBASIC2.14□□□□□ -2.07
Col6a3E9PWQ3 Gm14898-201ENSMUST00000120202 645 ntBASIC2.14□□□□□ -2.07
Col6a3E9PWQ3 Gm15089-201ENSMUST00000122332 1196 ntBASIC2.14□□□□□ -2.07
Col6a3E9PWQ3 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
Col6a3E9PWQ3 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
Col6a3E9PWQ3 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Col6a3E9PWQ3 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Col6a3E9PWQ3 Gm29429-201ENSMUST00000187071 121 ntBASIC2.14□□□□□ -2.07
Col6a3E9PWQ3 Mir221-201ENSMUST00000083488 95 ntBASIC2.14□□□□□ -2.07
Col6a3E9PWQ3 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Col6a3E9PWQ3 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Col6a3E9PWQ3 Mir1903-201ENSMUST00000122574 80 ntBASIC2.13□□□□□ -2.07
Col6a3E9PWQ3 Gm17153-201ENSMUST00000171314 490 ntBASIC2.13□□□□□ -2.07
Col6a3E9PWQ3 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Col6a3E9PWQ3 Gm26983-201ENSMUST00000182051 388 ntBASIC2.13□□□□□ -2.07
Col6a3E9PWQ3 Gm45778-201ENSMUST00000211959 153 ntBASIC2.13□□□□□ -2.07
Col6a3E9PWQ3 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
Col6a3E9PWQ3 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Col6a3E9PWQ3 Gm44789-201ENSMUST00000207195 3101 ntBASIC2.13□□□□□ -2.07
Col6a3E9PWQ3 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
Col6a3E9PWQ3 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.13□□□□□ -2.07
Col6a3E9PWQ3 Gm6615-201ENSMUST00000199426 631 ntBASIC2.13□□□□□ -2.07
Col6a3E9PWQ3 Gm44462-201ENSMUST00000199696 129 ntBASIC2.13□□□□□ -2.07
Col6a3E9PWQ3 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC2.13□□□□□ -2.07
Col6a3E9PWQ3 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC2.13□□□□□ -2.07
Col6a3E9PWQ3 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Col6a3E9PWQ3 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.13□□□□□ -2.07
Col6a3E9PWQ3 AC158805.1-201ENSMUST00000218197 2631 ntBASIC2.13□□□□□ -2.07
Col6a3E9PWQ3 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Col6a3E9PWQ3 Gm7171-201ENSMUST00000177413 1349 ntBASIC2.12□□□□□ -2.07
Col6a3E9PWQ3 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Col6a3E9PWQ3 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC2.12□□□□□ -2.07
Col6a3E9PWQ3 Gm25996-201ENSMUST00000175393 117 ntBASIC2.12□□□□□ -2.07
Col6a3E9PWQ3 Gm44358-201ENSMUST00000196301 98 ntBASIC2.12□□□□□ -2.07
Col6a3E9PWQ3 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC2.12□□□□□ -2.07
Col6a3E9PWQ3 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Col6a3E9PWQ3 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.12□□□□□ -2.07
Col6a3E9PWQ3 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
Col6a3E9PWQ3 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Col6a3E9PWQ3 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC2.12□□□□□ -2.07
Col6a3E9PWQ3 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
Col6a3E9PWQ3 Gm14588-201ENSMUST00000119895 172 ntBASIC2.11□□□□□ -2.07
Col6a3E9PWQ3 Gm8679-201ENSMUST00000210651 1036 ntBASIC2.11□□□□□ -2.07
Col6a3E9PWQ3 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Col6a3E9PWQ3 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.11□□□□□ -2.07
Col6a3E9PWQ3 Gm12090-201ENSMUST00000118692 758 ntBASIC2.11□□□□□ -2.07
Col6a3E9PWQ3 Gm22891-201ENSMUST00000158641 164 ntBASIC2.11□□□□□ -2.07
Col6a3E9PWQ3 Gm27648-201ENSMUST00000184315 107 ntBASIC2.11□□□□□ -2.07
Col6a3E9PWQ3 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Col6a3E9PWQ3 Gm7582-201ENSMUST00000160831 603 ntBASIC2.11□□□□□ -2.07
Col6a3E9PWQ3 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
Col6a3E9PWQ3 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC2.11□□□□□ -2.07
Col6a3E9PWQ3 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC2.11□□□□□ -2.07
Col6a3E9PWQ3 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC2.11□□□□□ -2.07
Col6a3E9PWQ3 Gm11392-201ENSMUST00000181419 710 ntBASIC2.11□□□□□ -2.07
Col6a3E9PWQ3 Gm45317-201ENSMUST00000210385 223 ntBASIC2.11□□□□□ -2.07
Col6a3E9PWQ3 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
Col6a3E9PWQ3 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.11□□□□□ -2.07
Col6a3E9PWQ3 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC2.11□□□□□ -2.07
Col6a3E9PWQ3 Gm37158-201ENSMUST00000191652 5704 ntBASIC2.1□□□□□ -2.07
Col6a3E9PWQ3 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.1□□□□□ -2.07
Col6a3E9PWQ3 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.1□□□□□ -2.07
Col6a3E9PWQ3 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Col6a3E9PWQ3 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.1□□□□□ -2.07
Col6a3E9PWQ3 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC2.1□□□□□ -2.07
Col6a3E9PWQ3 Olfr1278-205ENSMUST00000215210 6901 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Col6a3E9PWQ3 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Col6a3E9PWQ3 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Col6a3E9PWQ3 Gm14527-201ENSMUST00000179300 639 ntBASIC2.1□□□□□ -2.07
Col6a3E9PWQ3 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC2.1□□□□□ -2.07
Col6a3E9PWQ3 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Col6a3E9PWQ3 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
Col6a3E9PWQ3 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms