Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Gm28724-201ENSMUST00000186149 625 ntBASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Gm46194-201ENSMUST00000218136 320 ntBASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Ushbp1Q8R370 AC139376.1-201ENSMUST00000220056 1250 ntBASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC4.58□□□□□ -1.68
Ushbp1Q8R370 CT030238.4-201ENSMUST00000228579 801 ntBASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Ushbp1Q8R370 AC125532.1-201ENSMUST00000216210 2334 ntBASIC4.58□□□□□ -1.68
Ushbp1Q8R370 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Ushbp1Q8R370 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Gm14015-201ENSMUST00000130634 3949 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Gm12173-201ENSMUST00000117622 273 ntBASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Gm11429-201ENSMUST00000119089 144 ntBASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Gm14008-201ENSMUST00000120483 274 ntBASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Gm11281-201ENSMUST00000141391 576 ntBASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Gm26187-201ENSMUST00000157693 101 ntBASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Ear-ps3-201ENSMUST00000168308 445 ntBASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Gm7094-201ENSMUST00000178379 366 ntBASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Gm24306-201ENSMUST00000180229 79 ntBASIC4.57□□□□□ -1.68
Ushbp1Q8R370 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Gm18505-201ENSMUST00000187360 790 ntBASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Gm28784-201ENSMUST00000187817 1011 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Gm28267-201ENSMUST00000191093 265 ntBASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Ushbp1Q8R370 1700040K01Rik-201ENSMUST00000195145 438 ntBASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Gm45173-201ENSMUST00000206819 305 ntBASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Gm45232-201ENSMUST00000207811 162 ntBASIC4.57□□□□□ -1.68
Ushbp1Q8R370 AC152415.1-201ENSMUST00000213320 440 ntBASIC4.57□□□□□ -1.68
Ushbp1Q8R370 AC162387.1-201ENSMUST00000213369 213 ntBASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Gm8249-201ENSMUST00000219225 465 ntBASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Gm8274-201ENSMUST00000219820 463 ntBASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Gm18116-201ENSMUST00000220920 537 ntBASIC4.57□□□□□ -1.68
Ushbp1Q8R370 AC174082.1-201ENSMUST00000221106 307 ntBASIC4.57□□□□□ -1.68
Ushbp1Q8R370 AC154600.1-201ENSMUST00000226480 714 ntBASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Gm9845-201ENSMUST00000056409 598 ntBASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Gm26121-201ENSMUST00000083364 162 ntBASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Tenm1-202ENSMUST00000115058 12837 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Ifi213-201ENSMUST00000097462 2680 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Ushbp1Q8R370 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Gm44078-201ENSMUST00000204652 2646 ntBASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Nebl-207ENSMUST00000132418 1734 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Gm8666-201ENSMUST00000117517 292 ntBASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Gm15175-201ENSMUST00000117629 132 ntBASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Gm12252-201ENSMUST00000119517 219 ntBASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Gm11606-201ENSMUST00000120706 617 ntBASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Gm14129-201ENSMUST00000122436 291 ntBASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Gm23167-201ENSMUST00000157155 103 ntBASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Gm25909-201ENSMUST00000157619 121 ntBASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Gm24853-201ENSMUST00000158026 121 ntBASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Gm23215-201ENSMUST00000178153 121 ntBASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Gm26701-201ENSMUST00000181571 234 ntBASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Gm27660-201ENSMUST00000184028 208 ntBASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Mir6345-201ENSMUST00000184286 128 ntBASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Gm28785-201ENSMUST00000187478 379 ntBASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Gm5368-201ENSMUST00000189012 589 ntBASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Gm37658-201ENSMUST00000192672 315 ntBASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Gm45588-201ENSMUST00000211213 630 ntBASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
Ushbp1Q8R370 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.56□□□□□ -1.68
Ushbp1Q8R370 AC159621.1-201ENSMUST00000223249 163 ntBASIC4.56□□□□□ -1.68
Ushbp1Q8R370 AC134254.5-201ENSMUST00000223436 400 ntBASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Ushbp1Q8R370 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Ushbp1Q8R370 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Ushbp1Q8R370 Gm37903-201ENSMUST00000192122 2381 ntBASIC4.55□□□□□ -1.68
Ushbp1Q8R370 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
Ushbp1Q8R370 Gm22472-201ENSMUST00000104115 134 ntBASIC4.55□□□□□ -1.68
Ushbp1Q8R370 Gm14359-201ENSMUST00000118883 424 ntBASIC4.55□□□□□ -1.68
Ushbp1Q8R370 Gm25294-201ENSMUST00000122791 104 ntBASIC4.55□□□□□ -1.68
Ushbp1Q8R370 Gm9498-201ENSMUST00000140849 291 ntBASIC4.55□□□□□ -1.68
Ushbp1Q8R370 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC4.55□□□□□ -1.68
Ushbp1Q8R370 Gm26036-201ENSMUST00000158149 144 ntBASIC4.55□□□□□ -1.68
Ushbp1Q8R370 Gm22434-201ENSMUST00000158549 122 ntBASIC4.55□□□□□ -1.68
Ushbp1Q8R370 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms