Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm5034-201ENSMUST00000199115 634 ntBASIC4.5□□□□□ -1.69
Vps53Q8CCB4 Gm44348-201ENSMUST00000200165 122 ntBASIC4.5□□□□□ -1.69
Vps53Q8CCB4 Gm44703-201ENSMUST00000205724 248 ntBASIC4.5□□□□□ -1.69
Vps53Q8CCB4 Gm7624-201ENSMUST00000209702 435 ntBASIC4.5□□□□□ -1.69
Vps53Q8CCB4 Gm4921-201ENSMUST00000219804 992 ntBASIC4.5□□□□□ -1.69
Vps53Q8CCB4 AC160865.1-201ENSMUST00000219873 151 ntBASIC4.5□□□□□ -1.69
Vps53Q8CCB4 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Vps53Q8CCB4 AC099578.1-201ENSMUST00000220147 435 ntBASIC4.5□□□□□ -1.69
Vps53Q8CCB4 AC158142.2-201ENSMUST00000227892 635 ntBASIC4.5□□□□□ -1.69
Vps53Q8CCB4 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Vps53Q8CCB4 n-R5s166-201ENSMUST00000082898 121 ntBASIC4.5□□□□□ -1.69
Vps53Q8CCB4 Gm23443-201ENSMUST00000082916 128 ntBASIC4.5□□□□□ -1.69
Vps53Q8CCB4 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
Vps53Q8CCB4 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Vps53Q8CCB4 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Gm3636-202ENSMUST00000163850 1746 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Cdh7-201ENSMUST00000027542 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Vps53Q8CCB4 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Olfr301-201ENSMUST00000174362 1937 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Gm26387-201ENSMUST00000104238 132 ntBASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Gm15783-201ENSMUST00000117521 633 ntBASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Gm14142-201ENSMUST00000117833 296 ntBASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Gm14541-201ENSMUST00000118985 157 ntBASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Gm14867-201ENSMUST00000120156 866 ntBASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Gm13557-201ENSMUST00000120771 382 ntBASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Gm6079-201ENSMUST00000121356 404 ntBASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Gm23538-201ENSMUST00000157535 101 ntBASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Gm25706-201ENSMUST00000157828 247 ntBASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Gm23583-201ENSMUST00000158533 289 ntBASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Mir6408-201ENSMUST00000183643 91 ntBASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Mir6385-201ENSMUST00000184295 105 ntBASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Gm19777-201ENSMUST00000191940 358 ntBASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Gm38332-201ENSMUST00000194189 147 ntBASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Gm8041-201ENSMUST00000199755 616 ntBASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Gm5917-201ENSMUST00000217638 721 ntBASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Gm29884-201ENSMUST00000218403 453 ntBASIC4.49□□□□□ -1.69
Vps53Q8CCB4 AC127270.2-201ENSMUST00000221337 247 ntBASIC4.49□□□□□ -1.69
Vps53Q8CCB4 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC4.49□□□□□ -1.69
Vps53Q8CCB4 CT009713.9-201ENSMUST00000223604 389 ntBASIC4.49□□□□□ -1.69
Vps53Q8CCB4 AC192333.2-201ENSMUST00000224771 196 ntBASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Erbb4-201ENSMUST00000119142 11782 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Gm10287-202ENSMUST00000180599 4059 ntBASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.49□□□□□ -1.69
Vps53Q8CCB4 Gm36960-201ENSMUST00000195491 2035 ntBASIC4.48□□□□□ -1.69
Vps53Q8CCB4 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.48□□□□□ -1.69
Vps53Q8CCB4 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Vps53Q8CCB4 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.48□□□□□ -1.69
Vps53Q8CCB4 Gm4736-201ENSMUST00000100870 380 ntBASIC4.48□□□□□ -1.69
Vps53Q8CCB4 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Vps53Q8CCB4 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC4.48□□□□□ -1.69
Vps53Q8CCB4 Gm23198-201ENSMUST00000158811 91 ntBASIC4.48□□□□□ -1.69
Vps53Q8CCB4 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Vps53Q8CCB4 Gm27580-201ENSMUST00000183666 149 ntBASIC4.48□□□□□ -1.69
Vps53Q8CCB4 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC4.48□□□□□ -1.69
Vps53Q8CCB4 Gm29045-201ENSMUST00000187278 698 ntBASIC4.48□□□□□ -1.69
Vps53Q8CCB4 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Vps53Q8CCB4 Gm36964-201ENSMUST00000191876 198 ntBASIC4.48□□□□□ -1.69
Vps53Q8CCB4 Ighv3-7-201ENSMUST00000193370 348 ntBASIC4.48□□□□□ -1.69
Vps53Q8CCB4 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC4.48□□□□□ -1.69
Vps53Q8CCB4 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Vps53Q8CCB4 Gm8423-201ENSMUST00000211387 607 ntBASIC4.48□□□□□ -1.69
Vps53Q8CCB4 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC4.48□□□□□ -1.69
Vps53Q8CCB4 CT010455.1-201ENSMUST00000218579 413 ntBASIC4.48□□□□□ -1.69
Vps53Q8CCB4 CT009754.1-201ENSMUST00000223489 558 ntTSL 3 BASIC4.48□□□□□ -1.69
Vps53Q8CCB4 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.48□□□□□ -1.69
Vps53Q8CCB4 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Vps53Q8CCB4 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.48□□□□□ -1.69
Vps53Q8CCB4 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Vps53Q8CCB4 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Vps53Q8CCB4 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Vmn2r-ps47-201ENSMUST00000174515 2557 ntBASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Gm25088-201ENSMUST00000101803 79 ntBASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Gm26273-201ENSMUST00000104180 131 ntBASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Gm14197-201ENSMUST00000117480 1049 ntBASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Gm15025-201ENSMUST00000118434 418 ntBASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Gm14815-201ENSMUST00000120060 488 ntBASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Gm14392-201ENSMUST00000120332 401 ntBASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Gm15177-201ENSMUST00000120491 577 ntBASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Gm13852-201ENSMUST00000122350 242 ntBASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 101.4 ms