Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Rprd2-202ENSMUST00000197449 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Gm24578-201ENSMUST00000103970 129 ntBASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Gm24160-201ENSMUST00000104594 126 ntBASIC5.53□□□□□ -1.52
Trim47Q8C0E3 n-R5s52-201ENSMUST00000104614 113 ntBASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Gm11971-201ENSMUST00000117715 288 ntBASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Gm8145-201ENSMUST00000118220 745 ntBASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Gm13172-201ENSMUST00000118685 256 ntBASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Gm14119-201ENSMUST00000119511 235 ntBASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Gm8880-201ENSMUST00000121800 454 ntBASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Gm22870-201ENSMUST00000157501 112 ntBASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Gm25720-201ENSMUST00000157503 105 ntBASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Mir1946b-201ENSMUST00000157853 133 ntBASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Gm26501-201ENSMUST00000178307 107 ntBASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Gm34091-201ENSMUST00000200875 604 ntBASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Gm44473-201ENSMUST00000204039 152 ntBASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Gm2607-201ENSMUST00000212389 627 ntBASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Gm30313-201ENSMUST00000216806 597 ntTSL 3 BASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Selenok-ps6-201ENSMUST00000221812 283 ntBASIC5.53□□□□□ -1.52
Trim47Q8C0E3 AC156559.1-201ENSMUST00000224158 222 ntBASIC5.53□□□□□ -1.52
Trim47Q8C0E3 CT025525.4-201ENSMUST00000227728 277 ntBASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Gm24817-201ENSMUST00000093672 105 ntBASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Trim47Q8C0E3 AC153532.3-201ENSMUST00000218660 3848 ntBASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Trim47Q8C0E3 Gm45129-201ENSMUST00000208444 2224 ntBASIC5.52□□□□□ -1.53
Trim47Q8C0E3 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Trim47Q8C0E3 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim47Q8C0E3 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
Trim47Q8C0E3 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim47Q8C0E3 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim47Q8C0E3 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trim47Q8C0E3 Gm43784-201ENSMUST00000202922 2436 ntBASIC5.52□□□□□ -1.53
Trim47Q8C0E3 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim47Q8C0E3 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Trim47Q8C0E3 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Trim47Q8C0E3 Gm14868-201ENSMUST00000117840 216 ntBASIC5.52□□□□□ -1.53
Trim47Q8C0E3 Gm11623-201ENSMUST00000120176 1225 ntBASIC5.52□□□□□ -1.53
Trim47Q8C0E3 Gm26310-201ENSMUST00000157766 117 ntBASIC5.52□□□□□ -1.53
Trim47Q8C0E3 Gm18341-201ENSMUST00000197538 622 ntBASIC5.52□□□□□ -1.53
Trim47Q8C0E3 Gm44259-201ENSMUST00000204996 298 ntBASIC5.52□□□□□ -1.53
Trim47Q8C0E3 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC5.52□□□□□ -1.53
Trim47Q8C0E3 AC100733.1-201ENSMUST00000228494 407 ntBASIC5.52□□□□□ -1.53
Trim47Q8C0E3 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim47Q8C0E3 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim47Q8C0E3 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC5.52□□□□□ -1.53
Trim47Q8C0E3 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim47Q8C0E3 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Trim47Q8C0E3 AC123705.2-201ENSMUST00000221653 2009 ntBASIC5.52□□□□□ -1.53
Trim47Q8C0E3 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.51□□□□□ -1.53
Trim47Q8C0E3 R3hdm1-201ENSMUST00000036288 4795 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Gm37192-201ENSMUST00000194479 1348 ntBASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Gm20342-201ENSMUST00000185480 9720 ntBASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Gm23178-201ENSMUST00000116782 95 ntBASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Gm15058-201ENSMUST00000117689 458 ntBASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Gm12226-201ENSMUST00000144172 876 ntBASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Gm24441-201ENSMUST00000157235 281 ntBASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Gm25914-201ENSMUST00000157618 153 ntBASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Gm26186-201ENSMUST00000157689 125 ntBASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Gm25846-201ENSMUST00000158013 135 ntBASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Gm24085-201ENSMUST00000175172 116 ntBASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Gm23921-201ENSMUST00000175258 107 ntBASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Gm21893-201ENSMUST00000179119 397 ntBASIC5.51□□□□□ -1.53
Trim47Q8C0E3 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Gm1833-201ENSMUST00000191608 682 ntBASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Gm42665-201ENSMUST00000202100 586 ntBASIC5.51□□□□□ -1.53
Trim47Q8C0E3 CT485607.2-201ENSMUST00000214650 91 ntBASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Gm18188-201ENSMUST00000219386 478 ntBASIC5.51□□□□□ -1.53
Trim47Q8C0E3 AC156798.1-201ENSMUST00000220508 224 ntBASIC5.51□□□□□ -1.53
Trim47Q8C0E3 AC125543.1-201ENSMUST00000222778 101 ntBASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Gm23626-201ENSMUST00000082458 133 ntBASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Trim47Q8C0E3 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
Trim47Q8C0E3 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Trim47Q8C0E3 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms