Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Ccdc40Q8BI79 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 Gm25272-201ENSMUST00000104293 128 ntBASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 Mir878-201ENSMUST00000104680 78 ntBASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 Gm14566-201ENSMUST00000118915 321 ntBASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 Gm13541-201ENSMUST00000119519 283 ntBASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 Gm26100-201ENSMUST00000157245 127 ntBASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 Gm3025-201ENSMUST00000163454 489 ntBASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 Gm2878-201ENSMUST00000170173 486 ntBASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 Vmn1r-ps56-201ENSMUST00000172769 965 ntBASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 Gm27007-201ENSMUST00000183264 279 ntTSL 3 BASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 Gm27527-201ENSMUST00000183903 99 ntBASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 Gm37616-201ENSMUST00000193974 322 ntBASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 Gm36943-201ENSMUST00000194422 282 ntBASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 AC127302.1-201ENSMUST00000215973 1111 ntBASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 AC124569.1-201ENSMUST00000225932 101 ntBASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 Snora7a-201ENSMUST00000082629 140 ntBASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 Gm25592-201ENSMUST00000082635 131 ntBASIC3.34□□□□□ -1.87
Ccdc40Q8BI79 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.88
Ccdc40Q8BI79 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
Ccdc40Q8BI79 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.88
Ccdc40Q8BI79 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 Gm25727-201ENSMUST00000104522 131 ntBASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 Gm13329-201ENSMUST00000117063 265 ntBASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 Gm14622-201ENSMUST00000117117 468 ntBASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 Gm5937-201ENSMUST00000119715 643 ntBASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 Gm14898-201ENSMUST00000120202 645 ntBASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 Gm26254-201ENSMUST00000122491 118 ntBASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 Gm22532-201ENSMUST00000158822 140 ntBASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 Gm8649-201ENSMUST00000181799 233 ntBASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 Mir6338-201ENSMUST00000183389 109 ntBASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 Mir8103-201ENSMUST00000183945 107 ntBASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 Gm44061-201ENSMUST00000203962 1195 ntBASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 CT030184.1-201ENSMUST00000222393 416 ntBASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 AC102603.1-201ENSMUST00000227481 584 ntBASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 Gm26437-201ENSMUST00000082595 105 ntBASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 Gm23932-201ENSMUST00000082914 107 ntBASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 Gm24254-201ENSMUST00000083702 104 ntBASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 Gm25007-201ENSMUST00000083808 133 ntBASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Ccdc40Q8BI79 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Ccdc40Q8BI79 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ccdc40Q8BI79 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Ccdc40Q8BI79 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.32□□□□□ -1.88
Ccdc40Q8BI79 Gm13614-201ENSMUST00000117306 503 ntBASIC3.32□□□□□ -1.88
Ccdc40Q8BI79 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
Ccdc40Q8BI79 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC3.32□□□□□ -1.88
Ccdc40Q8BI79 Gm14159-201ENSMUST00000119832 451 ntBASIC3.32□□□□□ -1.88
Ccdc40Q8BI79 Gm12213-201ENSMUST00000119924 353 ntBASIC3.32□□□□□ -1.88
Ccdc40Q8BI79 Gm14915-201ENSMUST00000120747 204 ntBASIC3.32□□□□□ -1.88
Ccdc40Q8BI79 Gm25667-201ENSMUST00000157701 275 ntBASIC3.32□□□□□ -1.88
Ccdc40Q8BI79 Gm24008-201ENSMUST00000157733 138 ntBASIC3.32□□□□□ -1.88
Ccdc40Q8BI79 Gm25835-201ENSMUST00000158917 144 ntBASIC3.32□□□□□ -1.88
Ccdc40Q8BI79 Mir6907-201ENSMUST00000183764 71 ntBASIC3.32□□□□□ -1.88
Ccdc40Q8BI79 Mir6405-201ENSMUST00000184584 124 ntBASIC3.32□□□□□ -1.88
Ccdc40Q8BI79 Gm43531-201ENSMUST00000200676 1114 ntBASIC3.32□□□□□ -1.88
Ccdc40Q8BI79 Gm17838-201ENSMUST00000205872 876 ntBASIC3.32□□□□□ -1.88
Ccdc40Q8BI79 Gm18242-201ENSMUST00000218455 542 ntBASIC3.32□□□□□ -1.88
Ccdc40Q8BI79 Gm31849-201ENSMUST00000220306 375 ntBASIC3.32□□□□□ -1.88
Ccdc40Q8BI79 Gm17872-201ENSMUST00000222550 532 ntBASIC3.32□□□□□ -1.88
Ccdc40Q8BI79 AC158395.1-201ENSMUST00000227206 452 ntBASIC3.32□□□□□ -1.88
Ccdc40Q8BI79 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ccdc40Q8BI79 Olfr1447-203ENSMUST00000216989 2586 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Ccdc40Q8BI79 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Ccdc40Q8BI79 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm2066-201ENSMUST00000118046 389 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm13454-201ENSMUST00000118166 483 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm13603-201ENSMUST00000119404 83 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm2318-201ENSMUST00000119623 639 ntBASIC3.31□□□□□ -1.88
Ccdc40Q8BI79 Gm14877-201ENSMUST00000119803 478 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 342 ms