Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 AC118639.1-201ENSMUST00000227204 338 ntBASIC1.78□□□□□ -2.12
Col7a1Q63870 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Col7a1Q63870 Gm42841-201ENSMUST00000199806 1932 ntBASIC1.78□□□□□ -2.12
Col7a1Q63870 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Col7a1Q63870 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Col7a1Q63870 Gm25161-201ENSMUST00000158913 132 ntBASIC1.78□□□□□ -2.12
Col7a1Q63870 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Col7a1Q63870 1110015O18Rik-201ENSMUST00000183632 570 ntTSL 3 BASIC1.78□□□□□ -2.12
Col7a1Q63870 Gm17946-201ENSMUST00000186856 538 ntBASIC1.78□□□□□ -2.12
Col7a1Q63870 Gm37966-201ENSMUST00000193122 326 ntBASIC1.78□□□□□ -2.12
Col7a1Q63870 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
Col7a1Q63870 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Col7a1Q63870 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
Col7a1Q63870 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Col7a1Q63870 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC1.78□□□□□ -2.13
Col7a1Q63870 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
Col7a1Q63870 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.13
Col7a1Q63870 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
Col7a1Q63870 Gm14768-201ENSMUST00000122126 678 ntBASIC1.77□□□□□ -2.13
Col7a1Q63870 Snord53-201ENSMUST00000175146 78 ntBASIC1.77□□□□□ -2.13
Col7a1Q63870 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Col7a1Q63870 Gm28163-201ENSMUST00000187099 325 ntBASIC1.77□□□□□ -2.13
Col7a1Q63870 Gm43104-201ENSMUST00000197234 311 ntBASIC1.77□□□□□ -2.13
Col7a1Q63870 Gm36247-201ENSMUST00000211834 285 ntBASIC1.77□□□□□ -2.13
Col7a1Q63870 Gm18043-201ENSMUST00000216741 739 ntBASIC1.77□□□□□ -2.13
Col7a1Q63870 AC141642.1-201ENSMUST00000220598 229 ntBASIC1.77□□□□□ -2.13
Col7a1Q63870 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Col7a1Q63870 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC1.77□□□□□ -2.13
Col7a1Q63870 Gm16328-201ENSMUST00000126985 196 ntBASIC1.77□□□□□ -2.13
Col7a1Q63870 Gm25910-201ENSMUST00000157620 140 ntBASIC1.77□□□□□ -2.13
Col7a1Q63870 Gm24288-201ENSMUST00000157630 144 ntBASIC1.77□□□□□ -2.13
Col7a1Q63870 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC1.77□□□□□ -2.13
Col7a1Q63870 Mir7665-201ENSMUST00000184907 63 ntBASIC1.77□□□□□ -2.13
Col7a1Q63870 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Col7a1Q63870 Gm44083-201ENSMUST00000203114 337 ntBASIC1.77□□□□□ -2.13
Col7a1Q63870 Gm44011-201ENSMUST00000203336 394 ntBASIC1.77□□□□□ -2.13
Col7a1Q63870 Gm25628-201ENSMUST00000084002 105 ntBASIC1.77□□□□□ -2.13
Col7a1Q63870 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC1.77□□□□□ -2.13
Col7a1Q63870 Gm23708-201ENSMUST00000104367 123 ntBASIC1.77□□□□□ -2.13
Col7a1Q63870 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
Col7a1Q63870 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
Col7a1Q63870 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC1.77□□□□□ -2.13
Col7a1Q63870 Gm37543-201ENSMUST00000192443 1031 ntBASIC1.77□□□□□ -2.13
Col7a1Q63870 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.77□□□□□ -2.13
Col7a1Q63870 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.77□□□□□ -2.13
Col7a1Q63870 AC156560.3-201ENSMUST00000222978 3841 ntBASIC1.77□□□□□ -2.13
Col7a1Q63870 Olfr844-201ENSMUST00000054106 930 ntBASIC1.77□□□□□ -2.13
Col7a1Q63870 Olfr1176-201ENSMUST00000057439 949 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Col7a1Q63870 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Col7a1Q63870 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
Col7a1Q63870 Olfr862-202ENSMUST00000079660 2604 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Col7a1Q63870 Gm44230-201ENSMUST00000203032 3550 ntBASIC1.76□□□□□ -2.13
Col7a1Q63870 Mup-ps9-201ENSMUST00000178847 545 ntBASIC1.76□□□□□ -2.13
Col7a1Q63870 Mir7059-201ENSMUST00000184825 59 ntBASIC1.76□□□□□ -2.13
Col7a1Q63870 Gm25581-201ENSMUST00000083410 164 ntBASIC1.76□□□□□ -2.13
Col7a1Q63870 Gm19257-201ENSMUST00000186121 183 ntBASIC1.76□□□□□ -2.13
Col7a1Q63870 Gm19123-201ENSMUST00000190716 651 ntBASIC1.76□□□□□ -2.13
Col7a1Q63870 Gm45741-201ENSMUST00000212661 152 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Col7a1Q63870 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
Col7a1Q63870 Gm46312-201ENSMUST00000220961 420 ntBASIC1.76□□□□□ -2.13
Col7a1Q63870 Gm43486-201ENSMUST00000196431 4339 ntBASIC1.76□□□□□ -2.13
Col7a1Q63870 Gm14119-201ENSMUST00000119511 235 ntBASIC1.75□□□□□ -2.13
Col7a1Q63870 Gm18433-201ENSMUST00000192747 197 ntBASIC1.75□□□□□ -2.13
Col7a1Q63870 Gm2544-201ENSMUST00000222702 756 ntBASIC1.75□□□□□ -2.13
Col7a1Q63870 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Col7a1Q63870 Gm7709-201ENSMUST00000199391 1858 ntBASIC1.75□□□□□ -2.13
Col7a1Q63870 Gm14292-201ENSMUST00000118761 456 ntBASIC1.75□□□□□ -2.13
Col7a1Q63870 Gm6501-201ENSMUST00000187178 916 ntBASIC1.75□□□□□ -2.13
Col7a1Q63870 Gm28200-201ENSMUST00000187778 315 ntBASIC1.75□□□□□ -2.13
Col7a1Q63870 Gm29378-201ENSMUST00000188723 315 ntBASIC1.75□□□□□ -2.13
Col7a1Q63870 Gm28909-201ENSMUST00000189406 315 ntBASIC1.75□□□□□ -2.13
Col7a1Q63870 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC1.75□□□□□ -2.13
Col7a1Q63870 Mir6962-201ENSMUST00000199512 63 ntBASIC1.75□□□□□ -2.13
Col7a1Q63870 Gm18346-201ENSMUST00000216782 325 ntBASIC1.75□□□□□ -2.13
Col7a1Q63870 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Col7a1Q63870 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col7a1Q63870 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC1.75□□□□□ -2.13
Col7a1Q63870 Gm43320-201ENSMUST00000196047 2916 ntBASIC1.75□□□□□ -2.13
Col7a1Q63870 Pak3-201ENSMUST00000033640 8348 ntAPPRIS ALT1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col7a1Q63870 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Col7a1Q63870 Gm5724-201ENSMUST00000148411 2449 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Col7a1Q63870 Gm22311-201ENSMUST00000158006 110 ntBASIC1.74□□□□□ -2.13
Col7a1Q63870 Gm24863-201ENSMUST00000179499 107 ntBASIC1.74□□□□□ -2.13
Col7a1Q63870 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Col7a1Q63870 AC151831.1-201ENSMUST00000227609 4033 ntBASIC1.74□□□□□ -2.13
Col7a1Q63870 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Col7a1Q63870 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Col7a1Q63870 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Col7a1Q63870 Gm6923-201ENSMUST00000118343 406 ntBASIC1.74□□□□□ -2.13
Col7a1Q63870 Gm12788-201ENSMUST00000119090 308 ntBASIC1.74□□□□□ -2.13
Col7a1Q63870 Gm9785-202ENSMUST00000144563 593 ntBASIC1.74□□□□□ -2.13
Col7a1Q63870 Gm26983-201ENSMUST00000182051 388 ntBASIC1.74□□□□□ -2.13
Col7a1Q63870 Gm44376-201ENSMUST00000197570 128 ntBASIC1.74□□□□□ -2.13
Col7a1Q63870 Gm18899-201ENSMUST00000217663 546 ntBASIC1.74□□□□□ -2.13
Col7a1Q63870 AC159472.1-201ENSMUST00000218178 463 ntBASIC1.74□□□□□ -2.13
Col7a1Q63870 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
Col7a1Q63870 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Col7a1Q63870 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Col7a1Q63870 Gm37895-201ENSMUST00000192448 4550 ntBASIC1.74□□□□□ -2.13
Col7a1Q63870 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 102.7 ms