Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Usf1Q61069 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Usf1Q61069 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC2.93□□□□□ -1.94
Usf1Q61069 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
Usf1Q61069 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usf1Q61069 Gm43498-201ENSMUST00000202002 1486 ntBASIC2.92□□□□□ -1.94
Usf1Q61069 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC2.92□□□□□ -1.94
Usf1Q61069 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usf1Q61069 Gm42852-201ENSMUST00000202649 1379 ntBASIC2.92□□□□□ -1.94
Usf1Q61069 Trdn-208ENSMUST00000219982 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usf1Q61069 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC2.92□□□□□ -1.94
Usf1Q61069 Gm26423-201ENSMUST00000104277 128 ntBASIC2.92□□□□□ -1.94
Usf1Q61069 Gm14987-201ENSMUST00000117820 676 ntBASIC2.92□□□□□ -1.94
Usf1Q61069 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC2.92□□□□□ -1.94
Usf1Q61069 Gm24061-201ENSMUST00000157489 120 ntBASIC2.92□□□□□ -1.94
Usf1Q61069 Gm24819-201ENSMUST00000175094 166 ntBASIC2.92□□□□□ -1.94
Usf1Q61069 Gm22307-201ENSMUST00000180019 107 ntBASIC2.92□□□□□ -1.94
Usf1Q61069 Npn2-202ENSMUST00000189275 235 ntBASIC2.92□□□□□ -1.94
Usf1Q61069 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC2.92□□□□□ -1.94
Usf1Q61069 Gm38076-201ENSMUST00000193889 450 ntBASIC2.92□□□□□ -1.94
Usf1Q61069 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.92□□□□□ -1.94
Usf1Q61069 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC2.92□□□□□ -1.94
Usf1Q61069 Gm45380-201ENSMUST00000210465 315 ntBASIC2.92□□□□□ -1.94
Usf1Q61069 Gm46233-201ENSMUST00000217831 449 ntBASIC2.92□□□□□ -1.94
Usf1Q61069 AC154552.4-201ENSMUST00000222171 151 ntBASIC2.92□□□□□ -1.94
Usf1Q61069 CT025157.1-201ENSMUST00000226241 292 ntBASIC2.92□□□□□ -1.94
Usf1Q61069 AC134420.1-201ENSMUST00000227027 289 ntBASIC2.92□□□□□ -1.94
Usf1Q61069 AC166369.3-201ENSMUST00000227286 409 ntBASIC2.92□□□□□ -1.94
Usf1Q61069 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usf1Q61069 Gm23939-201ENSMUST00000082880 133 ntBASIC2.92□□□□□ -1.94
Usf1Q61069 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Usf1Q61069 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Usf1Q61069 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Usf1Q61069 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.92□□□□□ -1.94
Usf1Q61069 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Usf1Q61069 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Usf1Q61069 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Usf1Q61069 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Usf1Q61069 Gm22674-201ENSMUST00000104413 131 ntBASIC2.91□□□□□ -1.94
Usf1Q61069 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Usf1Q61069 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Usf1Q61069 Gm16431-201ENSMUST00000117454 431 ntBASIC2.91□□□□□ -1.94
Usf1Q61069 Gm14913-201ENSMUST00000120011 1093 ntBASIC2.91□□□□□ -1.94
Usf1Q61069 Gm14898-201ENSMUST00000120202 645 ntBASIC2.91□□□□□ -1.94
Usf1Q61069 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC2.91□□□□□ -1.94
Usf1Q61069 Gm23716-201ENSMUST00000157348 144 ntBASIC2.91□□□□□ -1.94
Usf1Q61069 Gm24720-201ENSMUST00000157518 166 ntBASIC2.91□□□□□ -1.94
Usf1Q61069 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Usf1Q61069 Gm13147-202ENSMUST00000177526 1173 ntBASIC2.91□□□□□ -1.94
Usf1Q61069 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC2.91□□□□□ -1.94
Usf1Q61069 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC2.91□□□□□ -1.94
Usf1Q61069 Gm44058-201ENSMUST00000204335 467 ntBASIC2.91□□□□□ -1.94
Usf1Q61069 Gm19244-201ENSMUST00000204340 253 ntBASIC2.91□□□□□ -1.94
Usf1Q61069 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC2.91□□□□□ -1.94
Usf1Q61069 Gm45530-201ENSMUST00000211658 225 ntBASIC2.91□□□□□ -1.94
Usf1Q61069 AC121966.1-201ENSMUST00000221458 282 ntBASIC2.91□□□□□ -1.94
Usf1Q61069 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.91□□□□□ -1.94
Usf1Q61069 CT030684.2-201ENSMUST00000228946 826 ntBASIC2.91□□□□□ -1.94
Usf1Q61069 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Usf1Q61069 Olfr194-201ENSMUST00000072608 921 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Usf1Q61069 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Usf1Q61069 Gm44789-201ENSMUST00000207195 3101 ntBASIC2.91□□□□□ -1.94
Usf1Q61069 Gm43404-201ENSMUST00000200424 2534 ntBASIC2.91□□□□□ -1.94
Usf1Q61069 Gm17976-201ENSMUST00000184037 1909 ntBASIC2.91□□□□□ -1.94
Usf1Q61069 AC164297.4-201ENSMUST00000224225 1307 ntBASIC2.91□□□□□ -1.94
Usf1Q61069 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Usf1Q61069 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
Usf1Q61069 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC2.9□□□□□ -1.94
Usf1Q61069 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
Usf1Q61069 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.95
Usf1Q61069 Gm13122-201ENSMUST00000118380 453 ntBASIC2.9□□□□□ -1.95
Usf1Q61069 Gm15090-201ENSMUST00000118787 1196 ntBASIC2.9□□□□□ -1.95
Usf1Q61069 Gm15103-201ENSMUST00000119893 871 ntBASIC2.9□□□□□ -1.95
Usf1Q61069 Gm15037-201ENSMUST00000120358 259 ntBASIC2.9□□□□□ -1.95
Usf1Q61069 Gm15089-201ENSMUST00000122332 1196 ntBASIC2.9□□□□□ -1.95
Usf1Q61069 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC2.9□□□□□ -1.95
Usf1Q61069 Gm23754-201ENSMUST00000157576 63 ntBASIC2.9□□□□□ -1.95
Usf1Q61069 Gm22186-201ENSMUST00000157822 122 ntBASIC2.9□□□□□ -1.95
Usf1Q61069 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.9□□□□□ -1.95
Usf1Q61069 Mir3112-201ENSMUST00000175431 82 ntBASIC2.9□□□□□ -1.95
Usf1Q61069 Gm5527-201ENSMUST00000179821 642 ntBASIC2.9□□□□□ -1.95
Usf1Q61069 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC2.9□□□□□ -1.95
Usf1Q61069 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC2.9□□□□□ -1.95
Usf1Q61069 Gm27505-201ENSMUST00000185071 110 ntBASIC2.9□□□□□ -1.95
Usf1Q61069 Gm28623-201ENSMUST00000187219 192 ntBASIC2.9□□□□□ -1.95
Usf1Q61069 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Usf1Q61069 Gm43355-201ENSMUST00000196541 346 ntBASIC2.9□□□□□ -1.95
Usf1Q61069 Gm18748-201ENSMUST00000198507 622 ntBASIC2.9□□□□□ -1.95
Usf1Q61069 Gm43746-201ENSMUST00000200028 317 ntBASIC2.9□□□□□ -1.95
Usf1Q61069 AC124399.1-201ENSMUST00000218334 590 ntBASIC2.9□□□□□ -1.95
Usf1Q61069 AC153887.2-201ENSMUST00000219160 3838 ntBASIC2.9□□□□□ -1.95
Usf1Q61069 AC139376.1-201ENSMUST00000220056 1250 ntBASIC2.9□□□□□ -1.95
Usf1Q61069 Gm18388-201ENSMUST00000222339 557 ntBASIC2.9□□□□□ -1.95
Usf1Q61069 AC124569.1-201ENSMUST00000225932 101 ntBASIC2.9□□□□□ -1.95
Usf1Q61069 AC158142.2-201ENSMUST00000227892 635 ntBASIC2.9□□□□□ -1.95
Usf1Q61069 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Usf1Q61069 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Usf1Q61069 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
Usf1Q61069 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
Usf1Q61069 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms