Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Gm22885-201ENSMUST00000157410 107 ntBASIC2.93□□□□□ -1.94
Upf3bQ3ULL6 Gm22858-201ENSMUST00000174972 76 ntBASIC2.93□□□□□ -1.94
Upf3bQ3ULL6 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC2.93□□□□□ -1.94
Upf3bQ3ULL6 Gm30341-201ENSMUST00000194363 289 ntBASIC2.93□□□□□ -1.94
Upf3bQ3ULL6 Gm43897-201ENSMUST00000204019 309 ntBASIC2.93□□□□□ -1.94
Upf3bQ3ULL6 Gm45105-201ENSMUST00000207824 397 ntBASIC2.93□□□□□ -1.94
Upf3bQ3ULL6 Gm7751-201ENSMUST00000212868 709 ntBASIC2.93□□□□□ -1.94
Upf3bQ3ULL6 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.93□□□□□ -1.94
Upf3bQ3ULL6 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.93□□□□□ -1.94
Upf3bQ3ULL6 Zmym2-202ENSMUST00000223669 1281 ntBASIC2.93□□□□□ -1.94
Upf3bQ3ULL6 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
Upf3bQ3ULL6 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Upf3bQ3ULL6 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Upf3bQ3ULL6 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 Mir667-201ENSMUST00000102441 92 ntBASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 Gm24627-201ENSMUST00000122764 138 ntBASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 Gm26487-201ENSMUST00000158022 94 ntBASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 Gm22766-201ENSMUST00000158372 99 ntBASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 Gm23409-201ENSMUST00000158516 237 ntBASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 Gm8902-201ENSMUST00000174341 1096 ntBASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 Snord53-201ENSMUST00000175146 78 ntBASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 Gm20681-201ENSMUST00000176061 503 ntTSL 2 BASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 Gm23402-201ENSMUST00000178130 107 ntBASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 Gm27786-201ENSMUST00000184337 70 ntBASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 Gm45226-201ENSMUST00000206602 288 ntBASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 Gm19563-201ENSMUST00000222031 270 ntBASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 n-R5s50-201ENSMUST00000083168 111 ntBASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.92□□□□□ -1.94
Upf3bQ3ULL6 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Gm9043-201ENSMUST00000119677 314 ntBASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Gm15037-201ENSMUST00000120358 259 ntBASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Gm16021-201ENSMUST00000121176 219 ntBASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Gm22026-201ENSMUST00000122735 281 ntBASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Gm25373-201ENSMUST00000158156 115 ntBASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Gm24681-201ENSMUST00000158760 107 ntBASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Gm4540-201ENSMUST00000170669 429 ntBASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Gm19203-201ENSMUST00000174049 939 ntBASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Mir3965-201ENSMUST00000175570 69 ntBASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Gm22252-201ENSMUST00000179316 79 ntBASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Mir6401-201ENSMUST00000184499 109 ntBASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Gm34314-201ENSMUST00000203622 367 ntBASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Gm17976-201ENSMUST00000184037 1909 ntBASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
Upf3bQ3ULL6 Gm38278-201ENSMUST00000194715 1365 ntBASIC2.9□□□□□ -1.94
Upf3bQ3ULL6 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.9□□□□□ -1.95
Upf3bQ3ULL6 Gm14506-201ENSMUST00000121165 536 ntBASIC2.9□□□□□ -1.95
Upf3bQ3ULL6 Gm11321-201ENSMUST00000121257 902 ntBASIC2.9□□□□□ -1.95
Upf3bQ3ULL6 Gm15466-201ENSMUST00000122299 333 ntBASIC2.9□□□□□ -1.95
Upf3bQ3ULL6 Gm12591-201ENSMUST00000122407 1177 ntBASIC2.9□□□□□ -1.95
Upf3bQ3ULL6 Gm23887-201ENSMUST00000122683 172 ntBASIC2.9□□□□□ -1.95
Upf3bQ3ULL6 Gm16359-201ENSMUST00000124511 289 ntBASIC2.9□□□□□ -1.95
Upf3bQ3ULL6 Gm24240-201ENSMUST00000157785 135 ntBASIC2.9□□□□□ -1.95
Upf3bQ3ULL6 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC2.9□□□□□ -1.95
Upf3bQ3ULL6 Gm27330-201ENSMUST00000184689 132 ntBASIC2.9□□□□□ -1.95
Upf3bQ3ULL6 Npn2-202ENSMUST00000189275 235 ntBASIC2.9□□□□□ -1.95
Upf3bQ3ULL6 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Upf3bQ3ULL6 Gm44393-201ENSMUST00000197418 138 ntBASIC2.9□□□□□ -1.95
Upf3bQ3ULL6 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.9□□□□□ -1.95
Upf3bQ3ULL6 Crs-ps-201ENSMUST00000203723 760 ntBASIC2.9□□□□□ -1.95
Upf3bQ3ULL6 Gm44404-201ENSMUST00000203979 636 ntBASIC2.9□□□□□ -1.95
Upf3bQ3ULL6 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Upf3bQ3ULL6 AC153506.2-201ENSMUST00000218051 257 ntBASIC2.9□□□□□ -1.95
Upf3bQ3ULL6 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Upf3bQ3ULL6 AC167977.1-201ENSMUST00000221384 234 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms