Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm43024-201ENSMUST00000196770 4352 ntBASIC5.67□□□□□ -1.5
Col17a1Q07563 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col17a1Q07563 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col17a1Q07563 Gm26342-201ENSMUST00000104557 129 ntBASIC5.67□□□□□ -1.5
Col17a1Q07563 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Col17a1Q07563 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC5.67□□□□□ -1.5
Col17a1Q07563 Gm11456-201ENSMUST00000121070 256 ntBASIC5.67□□□□□ -1.5
Col17a1Q07563 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC5.67□□□□□ -1.5
Col17a1Q07563 Gm25909-201ENSMUST00000157619 121 ntBASIC5.67□□□□□ -1.5
Col17a1Q07563 Gm24853-201ENSMUST00000158026 121 ntBASIC5.67□□□□□ -1.5
Col17a1Q07563 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC5.67□□□□□ -1.5
Col17a1Q07563 Gm20693-201ENSMUST00000177431 211 ntBASIC5.67□□□□□ -1.5
Col17a1Q07563 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Col17a1Q07563 Gm17954-201ENSMUST00000195893 607 ntBASIC5.67□□□□□ -1.5
Col17a1Q07563 Gm44990-201ENSMUST00000203922 217 ntBASIC5.67□□□□□ -1.5
Col17a1Q07563 Gm43922-201ENSMUST00000205071 328 ntBASIC5.67□□□□□ -1.5
Col17a1Q07563 Gm45157-201ENSMUST00000208729 401 ntBASIC5.67□□□□□ -1.5
Col17a1Q07563 Gm45316-201ENSMUST00000210128 162 ntBASIC5.67□□□□□ -1.5
Col17a1Q07563 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC5.67□□□□□ -1.5
Col17a1Q07563 AC161254.1-201ENSMUST00000220310 3842 ntBASIC5.67□□□□□ -1.5
Col17a1Q07563 Gm30738-201ENSMUST00000221346 502 ntBASIC5.67□□□□□ -1.5
Col17a1Q07563 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col17a1Q07563 Mir181a-2-201ENSMUST00000083489 76 ntBASIC5.67□□□□□ -1.5
Col17a1Q07563 Gm37928-201ENSMUST00000193265 4131 ntBASIC5.67□□□□□ -1.5
Col17a1Q07563 Vmn2r-ps42-201ENSMUST00000174123 2083 ntBASIC5.67□□□□□ -1.5
Col17a1Q07563 Olfr1440-205ENSMUST00000216145 7542 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Col17a1Q07563 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Col17a1Q07563 Nfib-202ENSMUST00000064770 8429 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Col17a1Q07563 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col17a1Q07563 Mir1198-201ENSMUST00000116995 121 ntBASIC5.66□□□□□ -1.5
Col17a1Q07563 Gm11262-201ENSMUST00000119326 833 ntBASIC5.66□□□□□ -1.5
Col17a1Q07563 Gm14655-201ENSMUST00000120124 578 ntBASIC5.66□□□□□ -1.5
Col17a1Q07563 Gm11522-201ENSMUST00000120533 176 ntBASIC5.66□□□□□ -1.5
Col17a1Q07563 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC5.66□□□□□ -1.5
Col17a1Q07563 Gm24729-201ENSMUST00000158225 137 ntBASIC5.66□□□□□ -1.5
Col17a1Q07563 Gm23352-201ENSMUST00000158428 64 ntBASIC5.66□□□□□ -1.5
Col17a1Q07563 9130204L05Rik-201ENSMUST00000166173 489 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Col17a1Q07563 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC5.66□□□□□ -1.5
Col17a1Q07563 Gm23269-201ENSMUST00000178701 107 ntBASIC5.66□□□□□ -1.5
Col17a1Q07563 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC5.66□□□□□ -1.5
Col17a1Q07563 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC5.66□□□□□ -1.5
Col17a1Q07563 Gm42990-201ENSMUST00000199231 312 ntBASIC5.66□□□□□ -1.5
Col17a1Q07563 Gm44465-201ENSMUST00000199536 114 ntBASIC5.66□□□□□ -1.5
Col17a1Q07563 Gm45192-201ENSMUST00000206749 283 ntBASIC5.66□□□□□ -1.5
Col17a1Q07563 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC5.66□□□□□ -1.5
Col17a1Q07563 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col17a1Q07563 Gm25403-201ENSMUST00000082971 143 ntBASIC5.66□□□□□ -1.5
Col17a1Q07563 Gm24043-201ENSMUST00000083108 116 ntBASIC5.66□□□□□ -1.5
Col17a1Q07563 Gm24254-201ENSMUST00000083702 104 ntBASIC5.66□□□□□ -1.5
Col17a1Q07563 Gm45872-201ENSMUST00000209804 1584 ntBASIC5.66□□□□□ -1.5
Col17a1Q07563 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Col17a1Q07563 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
Col17a1Q07563 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC5.66□□□□□ -1.5
Col17a1Q07563 AC124562.2-201ENSMUST00000223888 2313 ntBASIC5.66□□□□□ -1.5
Col17a1Q07563 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Col17a1Q07563 Fus-202ENSMUST00000079045 2623 ntBASIC5.66□□□□□ -1.5
Col17a1Q07563 AC162910.1-201ENSMUST00000221219 1723 ntBASIC5.65□□□□□ -1.5
Col17a1Q07563 Gm25647-201ENSMUST00000101832 78 ntBASIC5.65□□□□□ -1.5
Col17a1Q07563 Gm25823-201ENSMUST00000101995 78 ntBASIC5.65□□□□□ -1.5
Col17a1Q07563 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Col17a1Q07563 Trav8d-2-201ENSMUST00000103605 334 ntAPPRIS ALT2 BASIC5.65□□□□□ -1.5
Col17a1Q07563 Gm6096-201ENSMUST00000105172 456 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Col17a1Q07563 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col17a1Q07563 Gm12025-201ENSMUST00000117768 144 ntBASIC5.65□□□□□ -1.5
Col17a1Q07563 Gm14897-201ENSMUST00000118213 207 ntBASIC5.65□□□□□ -1.5
Col17a1Q07563 Gm15387-201ENSMUST00000120421 648 ntBASIC5.65□□□□□ -1.5
Col17a1Q07563 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC5.65□□□□□ -1.5
Col17a1Q07563 Gm24220-201ENSMUST00000177753 79 ntBASIC5.65□□□□□ -1.5
Col17a1Q07563 Gm25988-201ENSMUST00000177759 79 ntBASIC5.65□□□□□ -1.5
Col17a1Q07563 Gm23471-201ENSMUST00000177886 79 ntBASIC5.65□□□□□ -1.5
Col17a1Q07563 Gm26488-201ENSMUST00000178225 79 ntBASIC5.65□□□□□ -1.5
Col17a1Q07563 Gm23449-201ENSMUST00000179208 79 ntBASIC5.65□□□□□ -1.5
Col17a1Q07563 Gm25221-201ENSMUST00000180051 79 ntBASIC5.65□□□□□ -1.5
Col17a1Q07563 Gm42621-201ENSMUST00000198114 275 ntBASIC5.65□□□□□ -1.5
Col17a1Q07563 Gm43228-201ENSMUST00000200735 264 ntBASIC5.65□□□□□ -1.5
Col17a1Q07563 AC161520.1-201ENSMUST00000210954 939 ntBASIC5.65□□□□□ -1.5
Col17a1Q07563 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC5.65□□□□□ -1.5
Col17a1Q07563 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
Col17a1Q07563 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Col17a1Q07563 Gm5518-201ENSMUST00000084171 648 ntBASIC5.65□□□□□ -1.5
Col17a1Q07563 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Col17a1Q07563 Fgf14-202ENSMUST00000095529 3608 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Col17a1Q07563 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
Col17a1Q07563 Gm38269-201ENSMUST00000194549 3298 ntBASIC5.65□□□□□ -1.5
Col17a1Q07563 Gm37176-201ENSMUST00000193300 4051 ntBASIC5.65□□□□□ -1.5
Col17a1Q07563 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Col17a1Q07563 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC5.65□□□□□ -1.51
Col17a1Q07563 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
Col17a1Q07563 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
Col17a1Q07563 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
Col17a1Q07563 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
Col17a1Q07563 Gm9427-201ENSMUST00000116187 651 ntBASIC5.64□□□□□ -1.51
Col17a1Q07563 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC5.64□□□□□ -1.51
Col17a1Q07563 Gm3757-201ENSMUST00000125878 675 ntBASIC5.64□□□□□ -1.51
Col17a1Q07563 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC5.64□□□□□ -1.51
Col17a1Q07563 Gm25866-201ENSMUST00000158245 112 ntBASIC5.64□□□□□ -1.51
Col17a1Q07563 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC5.64□□□□□ -1.51
Col17a1Q07563 Gm23047-201ENSMUST00000177661 94 ntBASIC5.64□□□□□ -1.51
Col17a1Q07563 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Col17a1Q07563 Gm25944-201ENSMUST00000178758 94 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms