Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Col6a1Q04857 Slc5a3-201ENSMUST00000113975 10913 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a1Q04857 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a1Q04857 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.09□□□□□ -1.59
Col6a1Q04857 Gm43326-201ENSMUST00000198459 1638 ntBASIC5.09□□□□□ -1.59
Col6a1Q04857 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a1Q04857 Gm38212-201ENSMUST00000194081 2756 ntBASIC5.09□□□□□ -1.59
Col6a1Q04857 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a1Q04857 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a1Q04857 Gm23578-201ENSMUST00000103943 104 ntBASIC5.09□□□□□ -1.59
Col6a1Q04857 Gm24120-201ENSMUST00000103978 129 ntBASIC5.09□□□□□ -1.59
Col6a1Q04857 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a1Q04857 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.09□□□□□ -1.59
Col6a1Q04857 Gm14823-201ENSMUST00000117698 238 ntBASIC5.09□□□□□ -1.59
Col6a1Q04857 Gm8129-201ENSMUST00000118230 213 ntBASIC5.09□□□□□ -1.59
Col6a1Q04857 Gm11631-201ENSMUST00000119220 156 ntBASIC5.09□□□□□ -1.59
Col6a1Q04857 Gm12771-201ENSMUST00000120246 135 ntBASIC5.09□□□□□ -1.59
Col6a1Q04857 Gm14101-201ENSMUST00000121502 473 ntBASIC5.09□□□□□ -1.59
Col6a1Q04857 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC5.09□□□□□ -1.59
Col6a1Q04857 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a1Q04857 Sox5os5-201ENSMUST00000152192 207 ntTSL 3 BASIC5.09□□□□□ -1.59
Col6a1Q04857 Gm24730-201ENSMUST00000158228 117 ntBASIC5.09□□□□□ -1.59
Col6a1Q04857 Gm2389-201ENSMUST00000160487 189 ntBASIC5.09□□□□□ -1.59
Col6a1Q04857 Gm24464-201ENSMUST00000179697 107 ntBASIC5.09□□□□□ -1.59
Col6a1Q04857 Gm6802-202ENSMUST00000186566 126 ntBASIC5.09□□□□□ -1.59
Col6a1Q04857 Gm29147-201ENSMUST00000186846 315 ntBASIC5.09□□□□□ -1.59
Col6a1Q04857 Gm28160-201ENSMUST00000191229 315 ntBASIC5.09□□□□□ -1.59
Col6a1Q04857 Gm44474-201ENSMUST00000196525 127 ntBASIC5.09□□□□□ -1.59
Col6a1Q04857 Gm5552-201ENSMUST00000197149 515 ntBASIC5.09□□□□□ -1.59
Col6a1Q04857 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.09□□□□□ -1.59
Col6a1Q04857 AL662807.1-201ENSMUST00000224183 126 ntBASIC5.09□□□□□ -1.59
Col6a1Q04857 Gm2710-201ENSMUST00000073196 603 ntBASIC5.09□□□□□ -1.59
Col6a1Q04857 Mir323-201ENSMUST00000083683 86 ntBASIC5.09□□□□□ -1.59
Col6a1Q04857 Gm43648-201ENSMUST00000197775 2485 ntBASIC5.09□□□□□ -1.59
Col6a1Q04857 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Col6a1Q04857 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Col6a1Q04857 Gm6162-201ENSMUST00000194870 2930 ntBASIC5.09□□□□□ -1.6
Col6a1Q04857 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Col6a1Q04857 Gm43281-201ENSMUST00000202522 2704 ntBASIC5.09□□□□□ -1.6
Col6a1Q04857 Gm37527-201ENSMUST00000192406 3547 ntBASIC5.09□□□□□ -1.6
Col6a1Q04857 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a1Q04857 Olfr1111-202ENSMUST00000214492 1616 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col6a1Q04857 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col6a1Q04857 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col6a1Q04857 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a1Q04857 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a1Q04857 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a1Q04857 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a1Q04857 Gm25169-201ENSMUST00000104190 129 ntBASIC5.08□□□□□ -1.6
Col6a1Q04857 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a1Q04857 Gm11698-201ENSMUST00000117948 455 ntBASIC5.08□□□□□ -1.6
Col6a1Q04857 Gm13557-201ENSMUST00000120771 382 ntBASIC5.08□□□□□ -1.6
Col6a1Q04857 Gm15022-201ENSMUST00000122074 746 ntBASIC5.08□□□□□ -1.6
Col6a1Q04857 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC5.08□□□□□ -1.6
Col6a1Q04857 Gm24774-201ENSMUST00000157384 134 ntBASIC5.08□□□□□ -1.6
Col6a1Q04857 Gm25341-201ENSMUST00000157461 268 ntBASIC5.08□□□□□ -1.6
Col6a1Q04857 Mir5134-201ENSMUST00000175529 78 ntBASIC5.08□□□□□ -1.6
Col6a1Q04857 Gm24949-201ENSMUST00000183609 215 ntBASIC5.08□□□□□ -1.6
Col6a1Q04857 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC5.08□□□□□ -1.6
Col6a1Q04857 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC5.08□□□□□ -1.6
Col6a1Q04857 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC5.08□□□□□ -1.6
Col6a1Q04857 Gm43286-201ENSMUST00000197420 424 ntBASIC5.08□□□□□ -1.6
Col6a1Q04857 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC5.08□□□□□ -1.6
Col6a1Q04857 Gm29884-201ENSMUST00000218403 453 ntBASIC5.08□□□□□ -1.6
Col6a1Q04857 AC154576.2-202ENSMUST00000223916 688 ntBASIC5.08□□□□□ -1.6
Col6a1Q04857 AC117656.3-202ENSMUST00000225842 1055 ntBASIC5.08□□□□□ -1.6
Col6a1Q04857 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a1Q04857 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a1Q04857 AC108802.1-201ENSMUST00000219501 3142 ntBASIC5.08□□□□□ -1.6
Col6a1Q04857 Msr1-202ENSMUST00000170091 3636 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a1Q04857 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col6a1Q04857 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col6a1Q04857 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
Col6a1Q04857 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Col6a1Q04857 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col6a1Q04857 Olfr808-202ENSMUST00000203236 4523 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Col6a1Q04857 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col6a1Q04857 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a1Q04857 B230206I08Rik-201ENSMUST00000207479 3191 ntBASIC5.07□□□□□ -1.6
Col6a1Q04857 Ccnb3-201ENSMUST00000056725 4475 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col6a1Q04857 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col6a1Q04857 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Col6a1Q04857 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Col6a1Q04857 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a1Q04857 Gm23746-201ENSMUST00000104229 125 ntBASIC5.07□□□□□ -1.6
Col6a1Q04857 Gm22498-201ENSMUST00000104497 86 ntBASIC5.07□□□□□ -1.6
Col6a1Q04857 Gm14622-201ENSMUST00000117117 468 ntBASIC5.07□□□□□ -1.6
Col6a1Q04857 n-R5s87-201ENSMUST00000122752 116 ntBASIC5.07□□□□□ -1.6
Col6a1Q04857 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC5.07□□□□□ -1.6
Col6a1Q04857 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC5.07□□□□□ -1.6
Col6a1Q04857 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a1Q04857 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC5.07□□□□□ -1.6
Col6a1Q04857 Gm22792-201ENSMUST00000157225 133 ntBASIC5.07□□□□□ -1.6
Col6a1Q04857 Gm25454-201ENSMUST00000157947 315 ntBASIC5.07□□□□□ -1.6
Col6a1Q04857 Gm24931-201ENSMUST00000158324 107 ntBASIC5.07□□□□□ -1.6
Col6a1Q04857 Gm7953-201ENSMUST00000168278 469 ntBASIC5.07□□□□□ -1.6
Col6a1Q04857 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC5.07□□□□□ -1.6
Col6a1Q04857 Gm13249-201ENSMUST00000177803 345 ntBASIC5.07□□□□□ -1.6
Col6a1Q04857 Gm13144-201ENSMUST00000179385 345 ntBASIC5.07□□□□□ -1.6
Col6a1Q04857 Gm24863-201ENSMUST00000179499 107 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms