Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Gm23932-201ENSMUST00000082914 107 ntBASIC5.21□□□□□ -1.58
Sox18P43680 Gm23511-201ENSMUST00000083084 164 ntBASIC5.21□□□□□ -1.58
Sox18P43680 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Sox18P43680 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sox18P43680 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Sox18P43680 Trim24-202ENSMUST00000120238 3258 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sox18P43680 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC5.21□□□□□ -1.58
Sox18P43680 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sox18P43680 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.21□□□□□ -1.58
Sox18P43680 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Sox18P43680 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Sox18P43680 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.21□□□□□ -1.58
Sox18P43680 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sox18P43680 AC126673.3-201ENSMUST00000223414 3829 ntBASIC5.21□□□□□ -1.58
Sox18P43680 Gm17056-201ENSMUST00000164804 2299 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Sox18P43680 Btf3l4-204ENSMUST00000102742 3141 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Sox18P43680 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.2□□□□□ -1.58
Sox18P43680 Zfp59-202ENSMUST00000205701 3437 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sox18P43680 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sox18P43680 Gtdc1-203ENSMUST00000112810 2564 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sox18P43680 Cftr-204ENSMUST00000129452 2835 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sox18P43680 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.2□□□□□ -1.58
Sox18P43680 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Sox18P43680 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Sox18P43680 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Sox18P43680 Fap-209ENSMUST00000174448 2271 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Sox18P43680 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.2□□□□□ -1.58
Sox18P43680 Gm7079-201ENSMUST00000119726 171 ntBASIC5.2□□□□□ -1.58
Sox18P43680 Gm11931-201ENSMUST00000121630 447 ntBASIC5.2□□□□□ -1.58
Sox18P43680 Gm22613-201ENSMUST00000122679 292 ntBASIC5.2□□□□□ -1.58
Sox18P43680 Gm22027-201ENSMUST00000122737 127 ntBASIC5.2□□□□□ -1.58
Sox18P43680 Gm23044-201ENSMUST00000157891 100 ntBASIC5.2□□□□□ -1.58
Sox18P43680 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Sox18P43680 Mir5129-201ENSMUST00000174938 78 ntBASIC5.2□□□□□ -1.58
Sox18P43680 Gm22411-201ENSMUST00000175462 126 ntBASIC5.2□□□□□ -1.58
Sox18P43680 Gm22002-201ENSMUST00000175622 125 ntBASIC5.2□□□□□ -1.58
Sox18P43680 Gm26972-201ENSMUST00000183218 344 ntTSL 3 BASIC5.2□□□□□ -1.58
Sox18P43680 Mir6907-201ENSMUST00000183764 71 ntBASIC5.2□□□□□ -1.58
Sox18P43680 Mir7074-201ENSMUST00000183884 63 ntBASIC5.2□□□□□ -1.58
Sox18P43680 Ighv1-46-201ENSMUST00000193988 351 ntBASIC5.2□□□□□ -1.58
Sox18P43680 Gm43616-201ENSMUST00000199347 409 ntTSL 3 BASIC5.2□□□□□ -1.58
Sox18P43680 Gm44108-201ENSMUST00000203525 422 ntBASIC5.2□□□□□ -1.58
Sox18P43680 Gm45907-201ENSMUST00000213023 193 ntBASIC5.2□□□□□ -1.58
Sox18P43680 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.2□□□□□ -1.58
Sox18P43680 Mir346-201ENSMUST00000083547 98 ntBASIC5.2□□□□□ -1.58
Sox18P43680 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Sox18P43680 Mbnl1-214ENSMUST00000193517 5151 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
Sox18P43680 Gm43891-201ENSMUST00000205132 3112 ntBASIC5.2□□□□□ -1.58
Sox18P43680 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.2□□□□□ -1.58
Sox18P43680 Rfx3-202ENSMUST00000165566 9146 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Sox18P43680 Olfr1301-202ENSMUST00000207590 4820 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Sox18P43680 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Sox18P43680 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sox18P43680 Zfp113-201ENSMUST00000049393 6470 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sox18P43680 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.2□□□□□ -1.58
Sox18P43680 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Sox18P43680 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Sox18P43680 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Sox18P43680 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sox18P43680 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sox18P43680 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sox18P43680 Gm37639-201ENSMUST00000191623 2785 ntBASIC5.19□□□□□ -1.58
Sox18P43680 Serpinb9-202ENSMUST00000063191 3472 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sox18P43680 Olfr1310-202ENSMUST00000213559 4897 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sox18P43680 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sox18P43680 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Sox18P43680 Gm25421-201ENSMUST00000104218 164 ntBASIC5.19□□□□□ -1.58
Sox18P43680 Mir1193-201ENSMUST00000116761 121 ntBASIC5.19□□□□□ -1.58
Sox18P43680 Gm14894-201ENSMUST00000117170 270 ntBASIC5.19□□□□□ -1.58
Sox18P43680 Gm11367-201ENSMUST00000117802 120 ntBASIC5.19□□□□□ -1.58
Sox18P43680 Gm15786-201ENSMUST00000121079 450 ntBASIC5.19□□□□□ -1.58
Sox18P43680 Gm13210-201ENSMUST00000121483 273 ntBASIC5.19□□□□□ -1.58
Sox18P43680 Gm15065-201ENSMUST00000121699 273 ntBASIC5.19□□□□□ -1.58
Sox18P43680 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC5.19□□□□□ -1.58
Sox18P43680 Gm25637-201ENSMUST00000157529 107 ntBASIC5.19□□□□□ -1.58
Sox18P43680 Gm22725-201ENSMUST00000158092 110 ntBASIC5.19□□□□□ -1.58
Sox18P43680 Scarna13-201ENSMUST00000158164 275 ntBASIC5.19□□□□□ -1.58
Sox18P43680 Gm22606-201ENSMUST00000158290 103 ntBASIC5.19□□□□□ -1.58
Sox18P43680 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Sox18P43680 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC5.19□□□□□ -1.58
Sox18P43680 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.19□□□□□ -1.58
Sox18P43680 Gm20526-201ENSMUST00000173416 158 ntBASIC5.19□□□□□ -1.58
Sox18P43680 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC5.19□□□□□ -1.58
Sox18P43680 Gm37449-201ENSMUST00000193016 270 ntBASIC5.19□□□□□ -1.58
Sox18P43680 Gm37617-201ENSMUST00000194309 159 ntBASIC5.19□□□□□ -1.58
Sox18P43680 Gm30341-201ENSMUST00000194363 289 ntBASIC5.19□□□□□ -1.58
Sox18P43680 Gm18658-201ENSMUST00000195558 270 ntBASIC5.19□□□□□ -1.58
Sox18P43680 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sox18P43680 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC5.19□□□□□ -1.58
Sox18P43680 AC134254.5-201ENSMUST00000223436 400 ntBASIC5.19□□□□□ -1.58
Sox18P43680 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
Sox18P43680 Gm22062-201ENSMUST00000082563 107 ntBASIC5.19□□□□□ -1.58
Sox18P43680 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Sox18P43680 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Sox18P43680 AC154755.2-201ENSMUST00000224384 2857 ntBASIC5.19□□□□□ -1.58
Sox18P43680 AC137871.4-201ENSMUST00000226323 3901 ntBASIC5.19□□□□□ -1.58
Sox18P43680 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Sox18P43680 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Sox18P43680 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
Sox18P43680 Ppip5k2-205ENSMUST00000171129 3425 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms