Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Sdc1P18828 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Sdc1P18828 Gm22657-201ENSMUST00000104197 132 ntBASIC2.52□□□□□ -2.01
Sdc1P18828 Gm24987-201ENSMUST00000104453 134 ntBASIC2.52□□□□□ -2.01
Sdc1P18828 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Sdc1P18828 Gm9157-201ENSMUST00000117673 225 ntBASIC2.52□□□□□ -2.01
Sdc1P18828 Gm2003-201ENSMUST00000118537 636 ntBASIC2.52□□□□□ -2.01
Sdc1P18828 Gm14898-201ENSMUST00000120202 645 ntBASIC2.52□□□□□ -2.01
Sdc1P18828 Gm12368-201ENSMUST00000122251 434 ntBASIC2.52□□□□□ -2.01
Sdc1P18828 Gm22480-201ENSMUST00000122568 128 ntBASIC2.52□□□□□ -2.01
Sdc1P18828 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Sdc1P18828 Gm22059-201ENSMUST00000157544 104 ntBASIC2.52□□□□□ -2.01
Sdc1P18828 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Sdc1P18828 Gm17164-201ENSMUST00000169013 506 ntBASIC2.52□□□□□ -2.01
Sdc1P18828 Gm22120-201ENSMUST00000175590 70 ntBASIC2.52□□□□□ -2.01
Sdc1P18828 Gm22910-201ENSMUST00000178568 132 ntBASIC2.52□□□□□ -2.01
Sdc1P18828 Gm26928-201ENSMUST00000182674 572 ntBASIC2.52□□□□□ -2.01
Sdc1P18828 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Sdc1P18828 Gm27611-201ENSMUST00000184690 108 ntBASIC2.52□□□□□ -2.01
Sdc1P18828 Gm38201-201ENSMUST00000192143 387 ntBASIC2.52□□□□□ -2.01
Sdc1P18828 Gm38214-201ENSMUST00000192581 988 ntBASIC2.52□□□□□ -2.01
Sdc1P18828 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC2.52□□□□□ -2.01
Sdc1P18828 Gm30341-201ENSMUST00000194363 289 ntBASIC2.52□□□□□ -2.01
Sdc1P18828 Gm37993-201ENSMUST00000195301 988 ntBASIC2.52□□□□□ -2.01
Sdc1P18828 Gm42924-201ENSMUST00000197261 185 ntBASIC2.52□□□□□ -2.01
Sdc1P18828 Gm18429-201ENSMUST00000198707 421 ntBASIC2.52□□□□□ -2.01
Sdc1P18828 Gm43531-201ENSMUST00000200676 1114 ntBASIC2.52□□□□□ -2.01
Sdc1P18828 Gm43991-201ENSMUST00000203751 274 ntBASIC2.52□□□□□ -2.01
Sdc1P18828 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Sdc1P18828 Gm45696-201ENSMUST00000212088 985 ntBASIC2.52□□□□□ -2.01
Sdc1P18828 Olfr936-202ENSMUST00000216912 937 ntBASIC2.52□□□□□ -2.01
Sdc1P18828 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC2.52□□□□□ -2.01
Sdc1P18828 AC109172.1-201ENSMUST00000227503 187 ntBASIC2.52□□□□□ -2.01
Sdc1P18828 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.52□□□□□ -2.01
Sdc1P18828 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Sdc1P18828 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Sdc1P18828 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Sdc1P18828 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Sdc1P18828 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.51□□□□□ -2.01
Sdc1P18828 Gm43379-201ENSMUST00000196253 7726 ntBASIC2.51□□□□□ -2.01
Sdc1P18828 Gm23271-201ENSMUST00000104052 124 ntBASIC2.51□□□□□ -2.01
Sdc1P18828 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Sdc1P18828 Gm15936-201ENSMUST00000118706 460 ntBASIC2.51□□□□□ -2.01
Sdc1P18828 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC2.51□□□□□ -2.01
Sdc1P18828 Gm24736-201ENSMUST00000158862 130 ntBASIC2.51□□□□□ -2.01
Sdc1P18828 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Sdc1P18828 Gm16285-201ENSMUST00000162999 347 ntBASIC2.51□□□□□ -2.01
Sdc1P18828 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Sdc1P18828 Gm24111-201ENSMUST00000175491 97 ntBASIC2.51□□□□□ -2.01
Sdc1P18828 Gm20648-201ENSMUST00000175815 328 ntBASIC2.51□□□□□ -2.01
Sdc1P18828 Gm24925-201ENSMUST00000178157 107 ntBASIC2.51□□□□□ -2.01
Sdc1P18828 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Sdc1P18828 Gm22917-201ENSMUST00000180116 110 ntBASIC2.51□□□□□ -2.01
Sdc1P18828 Gm11394-201ENSMUST00000181421 517 ntBASIC2.51□□□□□ -2.01
Sdc1P18828 Mir6960-201ENSMUST00000183449 61 ntBASIC2.51□□□□□ -2.01
Sdc1P18828 Gm27520-201ENSMUST00000184872 81 ntBASIC2.51□□□□□ -2.01
Sdc1P18828 Gm29658-201ENSMUST00000185404 230 ntBASIC2.51□□□□□ -2.01
Sdc1P18828 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Sdc1P18828 Gm29329-201ENSMUST00000189053 621 ntTSL 5 BASIC2.51□□□□□ -2.01
Sdc1P18828 Gm28331-201ENSMUST00000191102 621 ntTSL 5 BASIC2.51□□□□□ -2.01
Sdc1P18828 Gm1833-201ENSMUST00000191608 682 ntBASIC2.51□□□□□ -2.01
Sdc1P18828 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
Sdc1P18828 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.51□□□□□ -2.01
Sdc1P18828 Igkv13-82-201ENSMUST00000200308 346 ntBASIC2.51□□□□□ -2.01
Sdc1P18828 Gm44223-201ENSMUST00000204854 114 ntBASIC2.51□□□□□ -2.01
Sdc1P18828 Gm45687-201ENSMUST00000209454 155 ntBASIC2.51□□□□□ -2.01
Sdc1P18828 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Sdc1P18828 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
Sdc1P18828 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC2.51□□□□□ -2.01
Sdc1P18828 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC2.51□□□□□ -2.01
Sdc1P18828 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC2.51□□□□□ -2.01
Sdc1P18828 AC154276.2-201ENSMUST00000227707 309 ntBASIC2.51□□□□□ -2.01
Sdc1P18828 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Sdc1P18828 Gm5548-201ENSMUST00000055878 397 ntBASIC2.51□□□□□ -2.01
Sdc1P18828 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Sdc1P18828 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Sdc1P18828 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC2.51□□□□□ -2.01
Sdc1P18828 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.5□□□□□ -2.01
Sdc1P18828 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Sdc1P18828 Gm16436-201ENSMUST00000121510 1607 ntBASIC2.5□□□□□ -2.01
Sdc1P18828 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
Sdc1P18828 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Sdc1P18828 Gm22072-201ENSMUST00000116850 121 ntBASIC2.5□□□□□ -2.01
Sdc1P18828 Gm25391-201ENSMUST00000157342 134 ntBASIC2.5□□□□□ -2.01
Sdc1P18828 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Sdc1P18828 Gm20415-201ENSMUST00000172877 423 ntBASIC2.5□□□□□ -2.01
Sdc1P18828 Gm22395-201ENSMUST00000177427 96 ntBASIC2.5□□□□□ -2.01
Sdc1P18828 Gm27869-201ENSMUST00000184327 122 ntBASIC2.5□□□□□ -2.01
Sdc1P18828 Gm29045-201ENSMUST00000187278 698 ntBASIC2.5□□□□□ -2.01
Sdc1P18828 Gm28615-201ENSMUST00000187527 482 ntBASIC2.5□□□□□ -2.01
Sdc1P18828 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC2.5□□□□□ -2.01
Sdc1P18828 Gm37617-201ENSMUST00000194309 159 ntBASIC2.5□□□□□ -2.01
Sdc1P18828 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC2.5□□□□□ -2.01
Sdc1P18828 Trav12-4-201ENSMUST00000200663 271 ntBASIC2.5□□□□□ -2.01
Sdc1P18828 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC2.5□□□□□ -2.01
Sdc1P18828 Gm44157-201ENSMUST00000204720 410 ntBASIC2.5□□□□□ -2.01
Sdc1P18828 Gm44399-201ENSMUST00000205043 226 ntBASIC2.5□□□□□ -2.01
Sdc1P18828 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
Sdc1P18828 Gm19987-201ENSMUST00000216339 499 ntBASIC2.5□□□□□ -2.01
Sdc1P18828 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 107.7 ms