Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm28647-201ENSMUST00000188416 197 ntBASIC2.65□□□□□ -1.99
Cdx1P18111 Gm36934-201ENSMUST00000192007 306 ntBASIC2.65□□□□□ -1.99
Cdx1P18111 Gm37698-201ENSMUST00000192605 463 ntBASIC2.65□□□□□ -1.99
Cdx1P18111 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.65□□□□□ -1.99
Cdx1P18111 4933401J01Rik-201ENSMUST00000193812 1070 ntBASIC2.65□□□□□ -1.99
Cdx1P18111 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC2.65□□□□□ -1.99
Cdx1P18111 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC2.65□□□□□ -1.99
Cdx1P18111 Gm42818-201ENSMUST00000198869 987 ntBASIC2.65□□□□□ -1.99
Cdx1P18111 Gm32381-201ENSMUST00000203192 476 ntBASIC2.65□□□□□ -1.99
Cdx1P18111 Gm44118-201ENSMUST00000204665 229 ntBASIC2.65□□□□□ -1.99
Cdx1P18111 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.65□□□□□ -1.99
Cdx1P18111 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Cdx1P18111 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.65□□□□□ -1.99
Cdx1P18111 AC131743.3-201ENSMUST00000222099 662 ntBASIC2.65□□□□□ -1.99
Cdx1P18111 Gm10161-201ENSMUST00000091506 204 ntBASIC2.65□□□□□ -1.99
Cdx1P18111 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Cdx1P18111 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Cdx1P18111 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Cdx1P18111 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Cdx1P18111 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
Cdx1P18111 Gm8473-201ENSMUST00000176697 1885 ntBASIC2.65□□□□□ -1.99
Cdx1P18111 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC2.64□□□□□ -1.99
Cdx1P18111 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Cdx1P18111 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Cdx1P18111 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
Cdx1P18111 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Cdx1P18111 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
Cdx1P18111 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Cdx1P18111 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Cdx1P18111 Gm14825-201ENSMUST00000113538 701 ntBASIC2.64□□□□□ -1.99
Cdx1P18111 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC2.64□□□□□ -1.99
Cdx1P18111 Gm11869-201ENSMUST00000118701 329 ntBASIC2.64□□□□□ -1.99
Cdx1P18111 Gm12876-201ENSMUST00000120975 408 ntBASIC2.64□□□□□ -1.99
Cdx1P18111 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
Cdx1P18111 Gm26960-201ENSMUST00000182263 412 ntBASIC2.64□□□□□ -1.99
Cdx1P18111 Mir8103-201ENSMUST00000183945 107 ntBASIC2.64□□□□□ -1.99
Cdx1P18111 Gm37708-201ENSMUST00000192337 895 ntBASIC2.64□□□□□ -1.99
Cdx1P18111 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Cdx1P18111 AC127302.1-201ENSMUST00000215973 1111 ntBASIC2.64□□□□□ -1.99
Cdx1P18111 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC2.64□□□□□ -1.99
Cdx1P18111 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.64□□□□□ -1.99
Cdx1P18111 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.64□□□□□ -1.99
Cdx1P18111 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.64□□□□□ -1.99
Cdx1P18111 AC155314.1-201ENSMUST00000227624 508 ntBASIC2.64□□□□□ -1.99
Cdx1P18111 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Cdx1P18111 Gm25792-201ENSMUST00000083289 100 ntBASIC2.64□□□□□ -1.99
Cdx1P18111 Mir101b-201ENSMUST00000083622 97 ntBASIC2.64□□□□□ -1.99
Cdx1P18111 AF357428-201ENSMUST00000083815 69 ntBASIC2.64□□□□□ -1.99
Cdx1P18111 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
Cdx1P18111 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Cdx1P18111 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.64□□□□□ -1.99
Cdx1P18111 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
Cdx1P18111 Gm43326-201ENSMUST00000198459 1638 ntBASIC2.64□□□□□ -1.99
Cdx1P18111 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Cdx1P18111 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Cdx1P18111 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Cdx1P18111 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
Cdx1P18111 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC2.63□□□□□ -1.99
Cdx1P18111 Mir542-201ENSMUST00000102186 85 ntBASIC2.63□□□□□ -1.99
Cdx1P18111 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Cdx1P18111 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Cdx1P18111 Gm23609-201ENSMUST00000104542 127 ntBASIC2.63□□□□□ -1.99
Cdx1P18111 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.63□□□□□ -1.99
Cdx1P18111 Gm16274-201ENSMUST00000139251 592 ntBASIC2.63□□□□□ -1.99
Cdx1P18111 Gm23602-201ENSMUST00000157258 132 ntBASIC2.63□□□□□ -1.99
Cdx1P18111 Gm22390-201ENSMUST00000157588 325 ntBASIC2.63□□□□□ -1.99
Cdx1P18111 Gm23592-201ENSMUST00000157859 117 ntBASIC2.63□□□□□ -1.99
Cdx1P18111 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC2.63□□□□□ -1.99
Cdx1P18111 Gm26141-201ENSMUST00000175299 126 ntBASIC2.63□□□□□ -1.99
Cdx1P18111 Gm27903-201ENSMUST00000175482 126 ntBASIC2.63□□□□□ -1.99
Cdx1P18111 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Cdx1P18111 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Cdx1P18111 Gm28010-201ENSMUST00000179485 126 ntBASIC2.63□□□□□ -1.99
Cdx1P18111 Mir7578-201ENSMUST00000183455 82 ntBASIC2.63□□□□□ -1.99
Cdx1P18111 Gm27796-201ENSMUST00000183863 261 ntBASIC2.63□□□□□ -1.99
Cdx1P18111 Gm28002-201ENSMUST00000184832 100 ntBASIC2.63□□□□□ -1.99
Cdx1P18111 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Cdx1P18111 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Cdx1P18111 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC2.63□□□□□ -1.99
Cdx1P18111 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC2.63□□□□□ -1.99
Cdx1P18111 Gm18982-201ENSMUST00000198118 529 ntBASIC2.63□□□□□ -1.99
Cdx1P18111 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
Cdx1P18111 Gm44754-201ENSMUST00000208155 400 ntBASIC2.63□□□□□ -1.99
Cdx1P18111 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Cdx1P18111 Gm26571-203ENSMUST00000221865 555 ntTSL 2 BASIC2.63□□□□□ -1.99
Cdx1P18111 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC2.63□□□□□ -1.99
Cdx1P18111 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.63□□□□□ -1.99
Cdx1P18111 AC154692.1-201ENSMUST00000228314 544 ntBASIC2.63□□□□□ -1.99
Cdx1P18111 AC117588.3-201ENSMUST00000228517 325 ntBASIC2.63□□□□□ -1.99
Cdx1P18111 Gm9174-201ENSMUST00000078149 255 ntBASIC2.63□□□□□ -1.99
Cdx1P18111 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
Cdx1P18111 Gm42888-201ENSMUST00000202425 4361 ntBASIC2.63□□□□□ -1.99
Cdx1P18111 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
Cdx1P18111 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Cdx1P18111 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Cdx1P18111 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Cdx1P18111 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
Cdx1P18111 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC2.62□□□□□ -1.99
Cdx1P18111 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Cdx1P18111 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 9.8 ms