Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
Col6a3E9PWQ3 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC2.21□□□□□ -2.06
Col6a3E9PWQ3 Gm44533-201ENSMUST00000207782 268 ntBASIC2.21□□□□□ -2.06
Col6a3E9PWQ3 Gm45678-201ENSMUST00000210509 295 ntBASIC2.21□□□□□ -2.06
Col6a3E9PWQ3 Olfr808-201ENSMUST00000060636 939 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
Col6a3E9PWQ3 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.21□□□□□ -2.06
Col6a3E9PWQ3 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC2.21□□□□□ -2.06
Col6a3E9PWQ3 Gm11356-201ENSMUST00000118974 192 ntBASIC2.2□□□□□ -2.06
Col6a3E9PWQ3 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Col6a3E9PWQ3 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Col6a3E9PWQ3 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
Col6a3E9PWQ3 Gm24736-201ENSMUST00000158862 130 ntBASIC2.2□□□□□ -2.06
Col6a3E9PWQ3 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.2□□□□□ -2.06
Col6a3E9PWQ3 Gm27656-201ENSMUST00000185055 80 ntBASIC2.2□□□□□ -2.06
Col6a3E9PWQ3 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.2□□□□□ -2.06
Col6a3E9PWQ3 Gm45078-201ENSMUST00000205343 546 ntBASIC2.2□□□□□ -2.06
Col6a3E9PWQ3 Gm36247-201ENSMUST00000211834 285 ntBASIC2.2□□□□□ -2.06
Col6a3E9PWQ3 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
Col6a3E9PWQ3 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Col6a3E9PWQ3 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.2□□□□□ -2.06
Col6a3E9PWQ3 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.2□□□□□ -2.06
Col6a3E9PWQ3 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.2□□□□□ -2.06
Col6a3E9PWQ3 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC2.2□□□□□ -2.06
Col6a3E9PWQ3 Mir6962-201ENSMUST00000199512 63 ntBASIC2.2□□□□□ -2.06
Col6a3E9PWQ3 AC153899.1-201ENSMUST00000214092 1117 ntBASIC2.2□□□□□ -2.06
Col6a3E9PWQ3 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
Col6a3E9PWQ3 Vaultrc5-201ENSMUST00000083211 143 ntBASIC2.2□□□□□ -2.06
Col6a3E9PWQ3 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
Col6a3E9PWQ3 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Col6a3E9PWQ3 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC2.19□□□□□ -2.06
Col6a3E9PWQ3 Gm5900-201ENSMUST00000179862 375 ntBASIC2.19□□□□□ -2.06
Col6a3E9PWQ3 AC160016.1-201ENSMUST00000215589 448 ntBASIC2.19□□□□□ -2.06
Col6a3E9PWQ3 AC154816.2-201ENSMUST00000221918 372 ntTSL 5 BASIC2.19□□□□□ -2.06
Col6a3E9PWQ3 Snord14e-201ENSMUST00000082857 90 ntBASIC2.19□□□□□ -2.06
Col6a3E9PWQ3 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Col6a3E9PWQ3 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
Col6a3E9PWQ3 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC2.19□□□□□ -2.06
Col6a3E9PWQ3 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
Col6a3E9PWQ3 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC2.19□□□□□ -2.06
Col6a3E9PWQ3 Gm44548-201ENSMUST00000208929 192 ntBASIC2.19□□□□□ -2.06
Col6a3E9PWQ3 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
Col6a3E9PWQ3 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC2.19□□□□□ -2.06
Col6a3E9PWQ3 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col6a3E9PWQ3 Gm6501-201ENSMUST00000187178 916 ntBASIC2.18□□□□□ -2.06
Col6a3E9PWQ3 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC2.18□□□□□ -2.06
Col6a3E9PWQ3 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.18□□□□□ -2.06
Col6a3E9PWQ3 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.18□□□□□ -2.06
Col6a3E9PWQ3 Gm45588-201ENSMUST00000211213 630 ntBASIC2.18□□□□□ -2.06
Col6a3E9PWQ3 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
Col6a3E9PWQ3 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col6a3E9PWQ3 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Col6a3E9PWQ3 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC2.18□□□□□ -2.06
Col6a3E9PWQ3 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
Col6a3E9PWQ3 Gm12512-201ENSMUST00000119620 217 ntBASIC2.18□□□□□ -2.06
Col6a3E9PWQ3 Gm8430-201ENSMUST00000119780 471 ntBASIC2.18□□□□□ -2.06
Col6a3E9PWQ3 AC139186.1-201ENSMUST00000197610 94 ntBASIC2.18□□□□□ -2.06
Col6a3E9PWQ3 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.18□□□□□ -2.06
Col6a3E9PWQ3 AC157654.1-201ENSMUST00000224130 820 ntBASIC2.18□□□□□ -2.06
Col6a3E9PWQ3 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC2.18□□□□□ -2.06
Col6a3E9PWQ3 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
Col6a3E9PWQ3 Gm37703-201ENSMUST00000192292 1784 ntBASIC2.18□□□□□ -2.06
Col6a3E9PWQ3 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
Col6a3E9PWQ3 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.18□□□□□ -2.06
Col6a3E9PWQ3 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Col6a3E9PWQ3 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
Col6a3E9PWQ3 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Col6a3E9PWQ3 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Col6a3E9PWQ3 Ear-ps12-201ENSMUST00000161720 451 ntBASIC2.17□□□□□ -2.06
Col6a3E9PWQ3 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
Col6a3E9PWQ3 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Col6a3E9PWQ3 Gm15679-201ENSMUST00000161244 1936 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Col6a3E9PWQ3 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Col6a3E9PWQ3 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Col6a3E9PWQ3 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Col6a3E9PWQ3 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
Col6a3E9PWQ3 Gm14971-201ENSMUST00000117980 663 ntBASIC2.17□□□□□ -2.06
Col6a3E9PWQ3 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.17□□□□□ -2.06
Col6a3E9PWQ3 Gm27245-201ENSMUST00000184385 376 ntBASIC2.17□□□□□ -2.06
Col6a3E9PWQ3 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC2.17□□□□□ -2.06
Col6a3E9PWQ3 AC118006.1-201ENSMUST00000224211 501 ntBASIC2.17□□□□□ -2.06
Col6a3E9PWQ3 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Col6a3E9PWQ3 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
Col6a3E9PWQ3 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.17□□□□□ -2.06
Col6a3E9PWQ3 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
Col6a3E9PWQ3 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
Col6a3E9PWQ3 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC2.17□□□□□ -2.06
Col6a3E9PWQ3 Gm22929-201ENSMUST00000175517 107 ntBASIC2.16□□□□□ -2.06
Col6a3E9PWQ3 Gm37676-201ENSMUST00000195496 507 ntBASIC2.16□□□□□ -2.06
Col6a3E9PWQ3 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Col6a3E9PWQ3 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC2.16□□□□□ -2.06
Col6a3E9PWQ3 Gm42967-201ENSMUST00000198647 2312 ntBASIC2.16□□□□□ -2.06
Col6a3E9PWQ3 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC2.16□□□□□ -2.06
Col6a3E9PWQ3 Gm25945-201ENSMUST00000122484 135 ntBASIC2.16□□□□□ -2.06
Col6a3E9PWQ3 Gm6245-201ENSMUST00000164699 768 ntBASIC2.16□□□□□ -2.06
Col6a3E9PWQ3 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
Col6a3E9PWQ3 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
Col6a3E9PWQ3 Dnah12-201ENSMUST00000022433 12009 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Col6a3E9PWQ3 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Col6a3E9PWQ3 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC2.16□□□□□ -2.06
Col6a3E9PWQ3 Gm14794-201ENSMUST00000118181 192 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 90 ms