Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Gm7853-201ENSMUST00000100708 478 ntBASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Gm6134-201ENSMUST00000117265 171 ntBASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Gm6274-201ENSMUST00000118173 797 ntBASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Gm13424-201ENSMUST00000122301 354 ntBASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Gm5958-201ENSMUST00000147698 297 ntBASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Gm25342-201ENSMUST00000157459 122 ntBASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Gm23225-201ENSMUST00000158121 114 ntBASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Gm24940-201ENSMUST00000158326 108 ntBASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Mir6412-201ENSMUST00000184477 97 ntBASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Gm28353-201ENSMUST00000186482 570 ntBASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Gm28533-201ENSMUST00000186741 570 ntBASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Gm18177-201ENSMUST00000188373 404 ntBASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC4.79□□□□□ -1.64
Trim39Q9ESN2 AC161114.1-201ENSMUST00000218223 474 ntBASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.79□□□□□ -1.64
Trim39Q9ESN2 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Gm23508-201ENSMUST00000083079 72 ntBASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Gm17976-201ENSMUST00000184037 1909 ntBASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Olfr1286-203ENSMUST00000213210 3740 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim39Q9ESN2 AC154227.1-201ENSMUST00000228809 2467 ntBASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Trim39Q9ESN2 AC151734.1-201ENSMUST00000227023 1740 ntBASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim39Q9ESN2 AC139218.1-201ENSMUST00000228215 4287 ntBASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Gm25875-201ENSMUST00000104323 107 ntBASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Gm16242-201ENSMUST00000117741 334 ntBASIC4.78□□□□□ -1.64
Trim39Q9ESN2 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Mir1970-201ENSMUST00000157839 104 ntBASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Gm26489-201ENSMUST00000157880 264 ntBASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Gm23318-201ENSMUST00000158000 108 ntBASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Gm23892-201ENSMUST00000158105 130 ntBASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Mir7087-201ENSMUST00000184840 70 ntBASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Trbv11-201ENSMUST00000194354 260 ntBASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Gm37445-201ENSMUST00000195318 242 ntBASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Gm6543-201ENSMUST00000197353 808 ntBASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Mir409-201ENSMUST00000198153 79 ntBASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Gm7041-201ENSMUST00000201227 524 ntBASIC4.78□□□□□ -1.64
Trim39Q9ESN2 AC122332.1-201ENSMUST00000214384 285 ntBASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.78□□□□□ -1.64
Trim39Q9ESN2 AC125539.2-202ENSMUST00000227983 587 ntBASIC4.78□□□□□ -1.64
Trim39Q9ESN2 AC131178.1-201ENSMUST00000228649 492 ntBASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Gm42600-201ENSMUST00000202081 3588 ntBASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Gm14910-201ENSMUST00000121037 1805 ntBASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Gm43696-201ENSMUST00000199385 6071 ntBASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Cep290-201ENSMUST00000164751 8006 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Mybpc1-201ENSMUST00000119185 3752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Trim39Q9ESN2 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
Trim39Q9ESN2 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.65
Trim39Q9ESN2 AC154640.4-201ENSMUST00000226647 4640 ntBASIC4.77□□□□□ -1.65
Trim39Q9ESN2 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Trim39Q9ESN2 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Trim39Q9ESN2 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.77□□□□□ -1.65
Trim39Q9ESN2 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Trim39Q9ESN2 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Trim39Q9ESN2 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
Trim39Q9ESN2 Mir687-201ENSMUST00000102166 89 ntBASIC4.77□□□□□ -1.65
Trim39Q9ESN2 Gm23910-201ENSMUST00000104597 132 ntBASIC4.77□□□□□ -1.65
Trim39Q9ESN2 Gm8061-201ENSMUST00000122380 350 ntBASIC4.77□□□□□ -1.65
Trim39Q9ESN2 Trav20-201ENSMUST00000142754 347 ntBASIC4.77□□□□□ -1.65
Trim39Q9ESN2 Gm26412-201ENSMUST00000157666 55 ntBASIC4.77□□□□□ -1.65
Trim39Q9ESN2 Gm24395-201ENSMUST00000158139 125 ntBASIC4.77□□□□□ -1.65
Trim39Q9ESN2 Gm24348-201ENSMUST00000158710 130 ntBASIC4.77□□□□□ -1.65
Trim39Q9ESN2 Mir3058-201ENSMUST00000175126 91 ntBASIC4.77□□□□□ -1.65
Trim39Q9ESN2 Gm22917-201ENSMUST00000180116 110 ntBASIC4.77□□□□□ -1.65
Trim39Q9ESN2 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC4.77□□□□□ -1.65
Trim39Q9ESN2 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC4.77□□□□□ -1.65
Trim39Q9ESN2 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC4.77□□□□□ -1.65
Trim39Q9ESN2 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC4.77□□□□□ -1.65
Trim39Q9ESN2 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC4.77□□□□□ -1.65
Trim39Q9ESN2 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC4.77□□□□□ -1.65
Trim39Q9ESN2 Gm29140-201ENSMUST00000190187 476 ntBASIC4.77□□□□□ -1.65
Trim39Q9ESN2 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC4.77□□□□□ -1.65
Trim39Q9ESN2 Gm37167-201ENSMUST00000194946 396 ntBASIC4.77□□□□□ -1.65
Trim39Q9ESN2 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC4.77□□□□□ -1.65
Trim39Q9ESN2 Gm2926-201ENSMUST00000205625 239 ntBASIC4.77□□□□□ -1.65
Trim39Q9ESN2 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms