Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 AC149588.1-201ENSMUST00000228274 3745 ntBASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 Snord98-201ENSMUST00000116819 65 ntBASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 Gm25966-201ENSMUST00000157169 117 ntBASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 Gm22891-201ENSMUST00000158641 164 ntBASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 Gm17162-201ENSMUST00000168538 473 ntBASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 Gm18442-201ENSMUST00000220925 639 ntBASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 Gm9512-201ENSMUST00000223112 497 ntBASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 AL662807.1-201ENSMUST00000224183 126 ntBASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 AC129202.3-201ENSMUST00000224413 733 ntBASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 Gm44789-201ENSMUST00000207195 3101 ntBASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.86□□□□□ -1.63
Sh3rf1Q69ZI1 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm43736-201ENSMUST00000196377 2281 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm23193-201ENSMUST00000102427 82 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm15297-201ENSMUST00000117795 290 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm14566-201ENSMUST00000118915 321 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm13239-201ENSMUST00000119920 637 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm15213-201ENSMUST00000122098 216 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm26278-201ENSMUST00000157098 132 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm22084-201ENSMUST00000157585 105 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm8580-201ENSMUST00000160295 464 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm27492-201ENSMUST00000185194 187 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm29227-201ENSMUST00000187139 315 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm29034-201ENSMUST00000188099 315 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Sprr2g-202ENSMUST00000189634 651 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm37128-201ENSMUST00000192599 232 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm37817-201ENSMUST00000195276 434 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm37129-201ENSMUST00000195791 315 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm9238-201ENSMUST00000196181 329 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm42643-201ENSMUST00000200504 279 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm33654-201ENSMUST00000221704 215 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 AC241593.2-201ENSMUST00000225099 510 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 AC154515.2-201ENSMUST00000226093 406 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Sprr2g-201ENSMUST00000056590 650 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm22358-201ENSMUST00000082877 122 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm22571-201ENSMUST00000082984 70 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm25147-201ENSMUST00000083030 105 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm22974-201ENSMUST00000083301 103 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm25188-201ENSMUST00000083913 122 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Mir496a-201ENSMUST00000093627 79 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm37831-201ENSMUST00000191685 1787 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm38212-201ENSMUST00000194081 2756 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Sh3rf1Q69ZI1 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 Gm44250-201ENSMUST00000203092 4229 ntBASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 Gm24120-201ENSMUST00000103978 129 ntBASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 Gm14577-201ENSMUST00000121134 256 ntBASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 Gm14101-201ENSMUST00000121502 473 ntBASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 Gm24501-201ENSMUST00000158452 62 ntBASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 Gm8114-201ENSMUST00000172225 484 ntBASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 Gm4842-201ENSMUST00000183237 835 ntBASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 Gm2497-201ENSMUST00000189539 601 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms