Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm22011-201ENSMUST00000158790 123 ntBASIC5.58□□□□□ -1.52
Col9a1Q05722 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col9a1Q05722 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Col9a1Q05722 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC5.58□□□□□ -1.52
Col9a1Q05722 Gm27690-201ENSMUST00000184596 126 ntBASIC5.58□□□□□ -1.52
Col9a1Q05722 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC5.58□□□□□ -1.52
Col9a1Q05722 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Col9a1Q05722 Gm18956-201ENSMUST00000192857 480 ntBASIC5.58□□□□□ -1.52
Col9a1Q05722 Gm44474-201ENSMUST00000196525 127 ntBASIC5.58□□□□□ -1.52
Col9a1Q05722 Gm19096-201ENSMUST00000209705 766 ntBASIC5.58□□□□□ -1.52
Col9a1Q05722 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Col9a1Q05722 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col9a1Q05722 Utrn-201ENSMUST00000076817 12382 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col9a1Q05722 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Col9a1Q05722 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Col9a1Q05722 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col9a1Q05722 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col9a1Q05722 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col9a1Q05722 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col9a1Q05722 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col9a1Q05722 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col9a1Q05722 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.57□□□□□ -1.52
Col9a1Q05722 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col9a1Q05722 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Col9a1Q05722 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col9a1Q05722 Gm11826-201ENSMUST00000118781 438 ntBASIC5.57□□□□□ -1.52
Col9a1Q05722 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC5.57□□□□□ -1.52
Col9a1Q05722 Gm17669-201ENSMUST00000163749 465 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col9a1Q05722 Gm21991-201ENSMUST00000180006 508 ntBASIC5.57□□□□□ -1.52
Col9a1Q05722 Gm27564-201ENSMUST00000185196 96 ntBASIC5.57□□□□□ -1.52
Col9a1Q05722 Gm37838-201ENSMUST00000194464 312 ntBASIC5.57□□□□□ -1.52
Col9a1Q05722 Gm37417-201ENSMUST00000195257 454 ntBASIC5.57□□□□□ -1.52
Col9a1Q05722 Gm43028-201ENSMUST00000202561 481 ntBASIC5.57□□□□□ -1.52
Col9a1Q05722 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.57□□□□□ -1.52
Col9a1Q05722 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Col9a1Q05722 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Col9a1Q05722 Gm7108-201ENSMUST00000118038 3407 ntBASIC5.57□□□□□ -1.52
Col9a1Q05722 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC5.57□□□□□ -1.52
Col9a1Q05722 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Col9a1Q05722 Cyp2j5-201ENSMUST00000030299 2345 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col9a1Q05722 Gm37186-201ENSMUST00000195629 2861 ntBASIC5.57□□□□□ -1.52
Col9a1Q05722 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Col9a1Q05722 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Col9a1Q05722 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Col9a1Q05722 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
Col9a1Q05722 Tmem45a2-201ENSMUST00000067173 3073 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Col9a1Q05722 Olfr1300-ps1-201ENSMUST00000208175 2235 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col9a1Q05722 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col9a1Q05722 Zfp143-201ENSMUST00000084727 3003 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col9a1Q05722 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col9a1Q05722 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col9a1Q05722 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col9a1Q05722 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm37621-201ENSMUST00000194716 5531 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Arhgap12-202ENSMUST00000077128 4431 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col9a1Q05722 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col9a1Q05722 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC5.56□□□□□ -1.52
Col9a1Q05722 AC122024.1-201ENSMUST00000219276 4850 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm25089-201ENSMUST00000102015 79 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm23273-201ENSMUST00000104058 135 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm22710-201ENSMUST00000116892 125 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm13873-201ENSMUST00000119208 427 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm12488-201ENSMUST00000122449 499 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm23534-201ENSMUST00000157539 97 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm24692-201ENSMUST00000157761 146 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm16318-201ENSMUST00000162402 601 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Col9a1Q05722 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm25840-201ENSMUST00000177821 79 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm24952-201ENSMUST00000177909 79 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm23682-201ENSMUST00000178146 79 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm24652-201ENSMUST00000178223 79 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm22629-201ENSMUST00000178272 79 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm24021-201ENSMUST00000178435 79 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm22274-201ENSMUST00000178441 79 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm22050-201ENSMUST00000178442 79 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm23688-201ENSMUST00000178502 79 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm23944-201ENSMUST00000178607 79 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm26283-201ENSMUST00000178625 79 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm25452-201ENSMUST00000178776 79 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm23286-201ENSMUST00000178963 79 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm22640-201ENSMUST00000179035 79 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm25984-201ENSMUST00000179129 79 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm25585-201ENSMUST00000179469 79 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm23945-201ENSMUST00000179609 92 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm26374-201ENSMUST00000179737 79 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm24040-201ENSMUST00000179786 79 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm25017-201ENSMUST00000179805 79 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm23618-201ENSMUST00000179912 79 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm26284-201ENSMUST00000180107 79 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm24570-201ENSMUST00000180314 79 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm24654-201ENSMUST00000180315 79 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Col9a1Q05722 S100a14-203ENSMUST00000199538 483 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Col9a1Q05722 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm22806-201ENSMUST00000082738 136 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm24152-201ENSMUST00000082764 163 ntBASIC5.56□□□□□ -1.52
Col9a1Q05722 Gm26330-201ENSMUST00000082817 104 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms