Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 AC125523.1-201ENSMUST00000228018 934 ntBASIC3.38□□□□□ -1.87
Gabpb1Q00420 Gm24446-201ENSMUST00000083982 156 ntBASIC3.38□□□□□ -1.87
Gabpb1Q00420 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Gabpb1Q00420 Vmn1r45-208ENSMUST00000228662 3309 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Gabpb1Q00420 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Gabpb1Q00420 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
Gabpb1Q00420 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.38□□□□□ -1.87
Gabpb1Q00420 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Gabpb1Q00420 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.37□□□□□ -1.87
Gabpb1Q00420 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
Gabpb1Q00420 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Gabpb1Q00420 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
Gabpb1Q00420 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Gabpb1Q00420 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
Gabpb1Q00420 Gm14681-201ENSMUST00000118047 411 ntBASIC3.37□□□□□ -1.87
Gabpb1Q00420 Gm14915-201ENSMUST00000120747 204 ntBASIC3.37□□□□□ -1.87
Gabpb1Q00420 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC3.37□□□□□ -1.87
Gabpb1Q00420 Mup-ps12-201ENSMUST00000126217 549 ntBASIC3.37□□□□□ -1.87
Gabpb1Q00420 Gm23234-201ENSMUST00000157304 134 ntBASIC3.37□□□□□ -1.87
Gabpb1Q00420 Gm25572-201ENSMUST00000157527 172 ntBASIC3.37□□□□□ -1.87
Gabpb1Q00420 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC3.37□□□□□ -1.87
Gabpb1Q00420 Gm25874-201ENSMUST00000178030 79 ntBASIC3.37□□□□□ -1.87
Gabpb1Q00420 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Gabpb1Q00420 Gm29259-201ENSMUST00000186396 694 ntBASIC3.37□□□□□ -1.87
Gabpb1Q00420 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Gabpb1Q00420 Gm43384-201ENSMUST00000200569 637 ntBASIC3.37□□□□□ -1.87
Gabpb1Q00420 Gm18597-201ENSMUST00000209519 694 ntBASIC3.37□□□□□ -1.87
Gabpb1Q00420 Gm45636-201ENSMUST00000210497 1064 ntBASIC3.37□□□□□ -1.87
Gabpb1Q00420 Gm45439-201ENSMUST00000211723 359 ntBASIC3.37□□□□□ -1.87
Gabpb1Q00420 Gm30674-201ENSMUST00000214523 392 ntBASIC3.37□□□□□ -1.87
Gabpb1Q00420 Gm21007-201ENSMUST00000221024 326 ntBASIC3.37□□□□□ -1.87
Gabpb1Q00420 LOC667541-201ENSMUST00000223408 278 ntBASIC3.37□□□□□ -1.87
Gabpb1Q00420 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.37□□□□□ -1.87
Gabpb1Q00420 Gm23136-201ENSMUST00000083425 99 ntBASIC3.37□□□□□ -1.87
Gabpb1Q00420 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Gabpb1Q00420 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
Gabpb1Q00420 Gm37983-201ENSMUST00000193207 2006 ntBASIC3.37□□□□□ -1.87
Gabpb1Q00420 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Gabpb1Q00420 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.37□□□□□ -1.87
Gabpb1Q00420 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Gabpb1Q00420 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Gabpb1Q00420 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Gabpb1Q00420 Gm26423-201ENSMUST00000104277 128 ntBASIC3.36□□□□□ -1.87
Gabpb1Q00420 Gm23530-201ENSMUST00000104564 137 ntBASIC3.36□□□□□ -1.87
Gabpb1Q00420 Gm13454-201ENSMUST00000118166 483 ntBASIC3.36□□□□□ -1.87
Gabpb1Q00420 Gm14739-201ENSMUST00000120424 802 ntBASIC3.36□□□□□ -1.87
Gabpb1Q00420 Gm23326-201ENSMUST00000157419 105 ntBASIC3.36□□□□□ -1.87
Gabpb1Q00420 Gm22380-201ENSMUST00000157479 95 ntBASIC3.36□□□□□ -1.87
Gabpb1Q00420 Gm25666-201ENSMUST00000157702 107 ntBASIC3.36□□□□□ -1.87
Gabpb1Q00420 Gm25519-201ENSMUST00000158392 127 ntBASIC3.36□□□□□ -1.87
Gabpb1Q00420 Gm25977-201ENSMUST00000158697 85 ntBASIC3.36□□□□□ -1.87
Gabpb1Q00420 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC3.36□□□□□ -1.87
Gabpb1Q00420 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.36□□□□□ -1.87
Gabpb1Q00420 Gm26960-201ENSMUST00000182263 412 ntBASIC3.36□□□□□ -1.87
Gabpb1Q00420 Mir6408-201ENSMUST00000183643 91 ntBASIC3.36□□□□□ -1.87
Gabpb1Q00420 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC3.36□□□□□ -1.87
Gabpb1Q00420 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.36□□□□□ -1.87
Gabpb1Q00420 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC3.36□□□□□ -1.87
Gabpb1Q00420 Gm19620-201ENSMUST00000195972 434 ntBASIC3.36□□□□□ -1.87
Gabpb1Q00420 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.36□□□□□ -1.87
Gabpb1Q00420 Gm44387-201ENSMUST00000196298 145 ntBASIC3.36□□□□□ -1.87
Gabpb1Q00420 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.36□□□□□ -1.87
Gabpb1Q00420 Gm5551-201ENSMUST00000199720 690 ntBASIC3.36□□□□□ -1.87
Gabpb1Q00420 Gm44050-201ENSMUST00000204263 527 ntBASIC3.36□□□□□ -1.87
Gabpb1Q00420 Gm44927-201ENSMUST00000207573 716 ntBASIC3.36□□□□□ -1.87
Gabpb1Q00420 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC3.36□□□□□ -1.87
Gabpb1Q00420 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Gabpb1Q00420 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.36□□□□□ -1.87
Gabpb1Q00420 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
Gabpb1Q00420 AC122924.2-201ENSMUST00000220799 298 ntBASIC3.36□□□□□ -1.87
Gabpb1Q00420 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.36□□□□□ -1.87
Gabpb1Q00420 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Gabpb1Q00420 Gm22245-201ENSMUST00000082479 103 ntBASIC3.36□□□□□ -1.87
Gabpb1Q00420 Gm26128-201ENSMUST00000083170 110 ntBASIC3.36□□□□□ -1.87
Gabpb1Q00420 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Gabpb1Q00420 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Gabpb1Q00420 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
Gabpb1Q00420 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Gabpb1Q00420 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.35□□□□□ -1.87
Gabpb1Q00420 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.35□□□□□ -1.87
Gabpb1Q00420 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.35□□□□□ -1.87
Gabpb1Q00420 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Gabpb1Q00420 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Gabpb1Q00420 Gm15799-201ENSMUST00000120899 289 ntBASIC3.35□□□□□ -1.87
Gabpb1Q00420 Gm12693-201ENSMUST00000121965 483 ntBASIC3.35□□□□□ -1.87
Gabpb1Q00420 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.35□□□□□ -1.87
Gabpb1Q00420 Gm16274-201ENSMUST00000139251 592 ntBASIC3.35□□□□□ -1.87
Gabpb1Q00420 Gm24008-201ENSMUST00000157733 138 ntBASIC3.35□□□□□ -1.87
Gabpb1Q00420 Gm25835-201ENSMUST00000158917 144 ntBASIC3.35□□□□□ -1.87
Gabpb1Q00420 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Gabpb1Q00420 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Gabpb1Q00420 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Gabpb1Q00420 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC3.35□□□□□ -1.87
Gabpb1Q00420 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC3.35□□□□□ -1.87
Gabpb1Q00420 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC3.35□□□□□ -1.87
Gabpb1Q00420 Gm25873-201ENSMUST00000180317 107 ntBASIC3.35□□□□□ -1.87
Gabpb1Q00420 Gm29045-201ENSMUST00000187278 698 ntBASIC3.35□□□□□ -1.87
Gabpb1Q00420 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Gabpb1Q00420 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Gabpb1Q00420 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms