Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 AC154462.1-201ENSMUST00000228897 2260 ntBASIC3.4□□□□□ -1.86
SgcdP82347 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.86
SgcdP82347 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
SgcdP82347 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SgcdP82347 Gm26418-201ENSMUST00000104275 137 ntBASIC3.4□□□□□ -1.87
SgcdP82347 Gm14359-201ENSMUST00000118883 424 ntBASIC3.4□□□□□ -1.87
SgcdP82347 Gm11429-201ENSMUST00000119089 144 ntBASIC3.4□□□□□ -1.87
SgcdP82347 Gm12137-201ENSMUST00000119565 346 ntBASIC3.4□□□□□ -1.87
SgcdP82347 Gm14008-201ENSMUST00000120483 274 ntBASIC3.4□□□□□ -1.87
SgcdP82347 Gm14360-201ENSMUST00000120670 393 ntBASIC3.4□□□□□ -1.87
SgcdP82347 Gm12095-201ENSMUST00000121962 816 ntBASIC3.4□□□□□ -1.87
SgcdP82347 Gm14578-201ENSMUST00000122166 391 ntBASIC3.4□□□□□ -1.87
SgcdP82347 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC3.4□□□□□ -1.87
SgcdP82347 Gm9498-201ENSMUST00000140849 291 ntBASIC3.4□□□□□ -1.87
SgcdP82347 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC3.4□□□□□ -1.87
SgcdP82347 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC3.4□□□□□ -1.87
SgcdP82347 Gm22766-201ENSMUST00000158372 99 ntBASIC3.4□□□□□ -1.87
SgcdP82347 Gm3646-201ENSMUST00000171319 352 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SgcdP82347 Gm26556-201ENSMUST00000180645 320 ntBASIC3.4□□□□□ -1.87
SgcdP82347 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.4□□□□□ -1.87
SgcdP82347 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC3.4□□□□□ -1.87
SgcdP82347 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.4□□□□□ -1.87
SgcdP82347 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.4□□□□□ -1.87
SgcdP82347 Gm37979-201ENSMUST00000193065 712 ntBASIC3.4□□□□□ -1.87
SgcdP82347 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SgcdP82347 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.4□□□□□ -1.87
SgcdP82347 Gm42805-201ENSMUST00000196158 276 ntBASIC3.4□□□□□ -1.87
SgcdP82347 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC3.4□□□□□ -1.87
SgcdP82347 AC124542.1-201ENSMUST00000205588 908 ntBASIC3.4□□□□□ -1.87
SgcdP82347 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.4□□□□□ -1.87
SgcdP82347 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC3.4□□□□□ -1.87
SgcdP82347 Gm45439-201ENSMUST00000211723 359 ntBASIC3.4□□□□□ -1.87
SgcdP82347 Gm18557-201ENSMUST00000218710 433 ntBASIC3.4□□□□□ -1.87
SgcdP82347 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SgcdP82347 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
SgcdP82347 AC165146.1-201ENSMUST00000223777 900 ntBASIC3.4□□□□□ -1.87
SgcdP82347 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SgcdP82347 Gm5168-201ENSMUST00000089165 824 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SgcdP82347 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SgcdP82347 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SgcdP82347 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
SgcdP82347 Mier1-201ENSMUST00000030247 4703 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
SgcdP82347 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
SgcdP82347 Gm44164-201ENSMUST00000203605 2561 ntBASIC3.39□□□□□ -1.87
SgcdP82347 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
SgcdP82347 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SgcdP82347 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SgcdP82347 Gm24430-201ENSMUST00000104077 104 ntBASIC3.39□□□□□ -1.87
SgcdP82347 Gm14537-201ENSMUST00000117464 599 ntBASIC3.39□□□□□ -1.87
SgcdP82347 Gm13268-201ENSMUST00000117485 433 ntBASIC3.39□□□□□ -1.87
SgcdP82347 Gm11253-201ENSMUST00000118486 201 ntBASIC3.39□□□□□ -1.87
SgcdP82347 Gm14915-201ENSMUST00000120747 204 ntBASIC3.39□□□□□ -1.87
SgcdP82347 Gm11829-201ENSMUST00000121003 282 ntBASIC3.39□□□□□ -1.87
SgcdP82347 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.39□□□□□ -1.87
SgcdP82347 Gm6058-201ENSMUST00000154261 399 ntBASIC3.39□□□□□ -1.87
SgcdP82347 Gm22219-201ENSMUST00000157562 319 ntBASIC3.39□□□□□ -1.87
SgcdP82347 Gm25666-201ENSMUST00000157702 107 ntBASIC3.39□□□□□ -1.87
SgcdP82347 Gm23865-201ENSMUST00000157723 97 ntBASIC3.39□□□□□ -1.87
SgcdP82347 Gm2862-201ENSMUST00000161524 328 ntBASIC3.39□□□□□ -1.87
SgcdP82347 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SgcdP82347 Gm29704-201ENSMUST00000196011 253 ntBASIC3.39□□□□□ -1.87
SgcdP82347 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC3.39□□□□□ -1.87
SgcdP82347 Gm44274-201ENSMUST00000203417 256 ntBASIC3.39□□□□□ -1.87
SgcdP82347 Gm44990-201ENSMUST00000203922 217 ntBASIC3.39□□□□□ -1.87
SgcdP82347 Gm19244-201ENSMUST00000204340 253 ntBASIC3.39□□□□□ -1.87
SgcdP82347 Gm8745-201ENSMUST00000207846 782 ntBASIC3.39□□□□□ -1.87
SgcdP82347 Gm18597-201ENSMUST00000209519 694 ntBASIC3.39□□□□□ -1.87
SgcdP82347 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC3.39□□□□□ -1.87
SgcdP82347 Gm23925-201ENSMUST00000082471 132 ntBASIC3.39□□□□□ -1.87
SgcdP82347 Gm23518-201ENSMUST00000082835 153 ntBASIC3.39□□□□□ -1.87
SgcdP82347 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SgcdP82347 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SgcdP82347 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
SgcdP82347 Gm42446-201ENSMUST00000199783 3284 ntBASIC3.38□□□□□ -1.87
SgcdP82347 Gm12598-201ENSMUST00000117333 830 ntBASIC3.38□□□□□ -1.87
SgcdP82347 Gm14945-201ENSMUST00000119556 1118 ntBASIC3.38□□□□□ -1.87
SgcdP82347 Gm13239-201ENSMUST00000119920 637 ntBASIC3.38□□□□□ -1.87
SgcdP82347 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC3.38□□□□□ -1.87
SgcdP82347 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC3.38□□□□□ -1.87
SgcdP82347 Gm11692-201ENSMUST00000122121 902 ntBASIC3.38□□□□□ -1.87
SgcdP82347 Gm24314-201ENSMUST00000158274 123 ntBASIC3.38□□□□□ -1.87
SgcdP82347 Gm23025-201ENSMUST00000158769 111 ntBASIC3.38□□□□□ -1.87
SgcdP82347 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SgcdP82347 Gm3543-202ENSMUST00000179947 231 ntTSL 5 BASIC3.38□□□□□ -1.87
SgcdP82347 Mir6385-201ENSMUST00000184295 105 ntBASIC3.38□□□□□ -1.87
SgcdP82347 Gm29263-201ENSMUST00000188718 463 ntBASIC3.38□□□□□ -1.87
SgcdP82347 Gm6445-201ENSMUST00000189515 1112 ntBASIC3.38□□□□□ -1.87
SgcdP82347 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.38□□□□□ -1.87
SgcdP82347 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC3.38□□□□□ -1.87
SgcdP82347 Gm31230-201ENSMUST00000199725 785 ntBASIC3.38□□□□□ -1.87
SgcdP82347 Igkv11-114-201ENSMUST00000200013 346 ntBASIC3.38□□□□□ -1.87
SgcdP82347 Gm7652-201ENSMUST00000200440 1151 ntBASIC3.38□□□□□ -1.87
SgcdP82347 Gm44125-201ENSMUST00000203068 448 ntBASIC3.38□□□□□ -1.87
SgcdP82347 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.38□□□□□ -1.87
SgcdP82347 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC3.38□□□□□ -1.87
SgcdP82347 AC107864.1-201ENSMUST00000217937 496 ntBASIC3.38□□□□□ -1.87
SgcdP82347 AC157017.2-201ENSMUST00000218354 777 ntBASIC3.38□□□□□ -1.87
SgcdP82347 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.38□□□□□ -1.87
SgcdP82347 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.38□□□□□ -1.87
SgcdP82347 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms