Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm16436-201ENSMUST00000121510 1607 ntBASIC3.62□□□□□ -1.83
NcanP55066 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NcanP55066 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NcanP55066 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
NcanP55066 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.61□□□□□ -1.83
NcanP55066 Gpr82-201ENSMUST00000053659 2497 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NcanP55066 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.61□□□□□ -1.83
NcanP55066 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.61□□□□□ -1.83
NcanP55066 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
NcanP55066 Mir467h-201ENSMUST00000116759 121 ntBASIC3.61□□□□□ -1.83
NcanP55066 Gm13664-201ENSMUST00000117304 345 ntBASIC3.61□□□□□ -1.83
NcanP55066 Gm14518-201ENSMUST00000117351 542 ntBASIC3.61□□□□□ -1.83
NcanP55066 Gm15377-201ENSMUST00000119594 246 ntBASIC3.61□□□□□ -1.83
NcanP55066 Gm13170-201ENSMUST00000119716 643 ntBASIC3.61□□□□□ -1.83
NcanP55066 Gm13751-201ENSMUST00000120280 752 ntBASIC3.61□□□□□ -1.83
NcanP55066 Gm11896-201ENSMUST00000121105 820 ntBASIC3.61□□□□□ -1.83
NcanP55066 Gm14581-201ENSMUST00000121726 198 ntBASIC3.61□□□□□ -1.83
NcanP55066 Gm16331-201ENSMUST00000144274 498 ntBASIC3.61□□□□□ -1.83
NcanP55066 Gm22849-201ENSMUST00000157713 307 ntBASIC3.61□□□□□ -1.83
NcanP55066 Gm23317-201ENSMUST00000157999 129 ntBASIC3.61□□□□□ -1.83
NcanP55066 Gm25606-201ENSMUST00000158363 95 ntBASIC3.61□□□□□ -1.83
NcanP55066 Gm17085-201ENSMUST00000165425 502 ntBASIC3.61□□□□□ -1.83
NcanP55066 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC3.61□□□□□ -1.83
NcanP55066 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC3.61□□□□□ -1.83
NcanP55066 Gm28956-201ENSMUST00000189047 427 ntBASIC3.61□□□□□ -1.83
NcanP55066 Gm43494-201ENSMUST00000197672 388 ntBASIC3.61□□□□□ -1.83
NcanP55066 Gm24350-202ENSMUST00000198309 132 ntBASIC3.61□□□□□ -1.83
NcanP55066 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
NcanP55066 Gm43227-201ENSMUST00000202239 677 ntBASIC3.61□□□□□ -1.83
NcanP55066 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NcanP55066 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
NcanP55066 Gm5358-201ENSMUST00000212814 353 ntBASIC3.61□□□□□ -1.83
NcanP55066 AC091260.1-201ENSMUST00000216112 229 ntBASIC3.61□□□□□ -1.83
NcanP55066 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
NcanP55066 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
NcanP55066 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.61□□□□□ -1.83
NcanP55066 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
NcanP55066 AC151831.1-201ENSMUST00000227609 4033 ntBASIC3.61□□□□□ -1.83
NcanP55066 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
NcanP55066 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
NcanP55066 Gm37064-201ENSMUST00000193851 2231 ntBASIC3.6□□□□□ -1.83
NcanP55066 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NcanP55066 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NcanP55066 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
NcanP55066 Gm25509-201ENSMUST00000116985 106 ntBASIC3.6□□□□□ -1.83
NcanP55066 Gm13731-201ENSMUST00000117332 196 ntBASIC3.6□□□□□ -1.83
NcanP55066 Gm14506-201ENSMUST00000121165 536 ntBASIC3.6□□□□□ -1.83
NcanP55066 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC3.6□□□□□ -1.83
NcanP55066 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
NcanP55066 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
NcanP55066 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
NcanP55066 Scgb2b17-203ENSMUST00000182673 434 ntAPPRIS P2 TSL 2 BASIC3.6□□□□□ -1.83
NcanP55066 Scgb2b15-201ENSMUST00000182975 434 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
NcanP55066 Gm27659-201ENSMUST00000183472 98 ntBASIC3.6□□□□□ -1.83
NcanP55066 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NcanP55066 Mir7682-201ENSMUST00000198467 58 ntBASIC3.6□□□□□ -1.83
NcanP55066 Gm42526-201ENSMUST00000198956 393 ntBASIC3.6□□□□□ -1.83
NcanP55066 Gm44348-201ENSMUST00000200165 122 ntBASIC3.6□□□□□ -1.83
NcanP55066 Gm44282-201ENSMUST00000203199 190 ntBASIC3.6□□□□□ -1.83
NcanP55066 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC3.6□□□□□ -1.83
NcanP55066 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC3.6□□□□□ -1.83
NcanP55066 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC3.6□□□□□ -1.83
NcanP55066 Gm39033-201ENSMUST00000209158 1021 ntTSL 5 BASIC3.6□□□□□ -1.83
NcanP55066 AC156952.1-201ENSMUST00000220361 793 ntBASIC3.6□□□□□ -1.83
NcanP55066 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC3.6□□□□□ -1.83
NcanP55066 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NcanP55066 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.6□□□□□ -1.83
NcanP55066 Gm23460-201ENSMUST00000083258 109 ntBASIC3.6□□□□□ -1.83
NcanP55066 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
NcanP55066 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NcanP55066 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NcanP55066 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NcanP55066 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.6□□□□□ -1.83
NcanP55066 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
NcanP55066 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
NcanP55066 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
NcanP55066 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NcanP55066 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.59□□□□□ -1.83
NcanP55066 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.59□□□□□ -1.83
NcanP55066 Gm24962-201ENSMUST00000157917 109 ntBASIC3.59□□□□□ -1.83
NcanP55066 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.59□□□□□ -1.83
NcanP55066 Gm24816-201ENSMUST00000175311 151 ntBASIC3.59□□□□□ -1.83
NcanP55066 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC3.59□□□□□ -1.83
NcanP55066 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC3.59□□□□□ -1.83
NcanP55066 Gm27428-201ENSMUST00000184289 110 ntBASIC3.59□□□□□ -1.83
NcanP55066 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.59□□□□□ -1.83
NcanP55066 Gm27959-201ENSMUST00000185172 111 ntBASIC3.59□□□□□ -1.83
NcanP55066 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NcanP55066 Gm38332-201ENSMUST00000194189 147 ntBASIC3.59□□□□□ -1.83
NcanP55066 Gm3010-201ENSMUST00000198805 448 ntBASIC3.59□□□□□ -1.83
NcanP55066 Gm43384-201ENSMUST00000200569 637 ntBASIC3.59□□□□□ -1.83
NcanP55066 Gm34091-201ENSMUST00000200875 604 ntBASIC3.59□□□□□ -1.83
NcanP55066 Gm7726-201ENSMUST00000206241 231 ntBASIC3.59□□□□□ -1.83
NcanP55066 Gm45031-201ENSMUST00000206800 288 ntBASIC3.59□□□□□ -1.83
NcanP55066 Gm44844-201ENSMUST00000207242 336 ntBASIC3.59□□□□□ -1.83
NcanP55066 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
NcanP55066 AC192616.3-201ENSMUST00000220797 1124 ntBASIC3.59□□□□□ -1.83
NcanP55066 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NcanP55066 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
NcanP55066 AC172751.1-201ENSMUST00000226887 440 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms