Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm37732-201ENSMUST00000194377 316 ntBASIC4.93□□□□□ -1.62
Sox1P53783 Mir6516-201ENSMUST00000196236 110 ntBASIC4.93□□□□□ -1.62
Sox1P53783 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC4.93□□□□□ -1.62
Sox1P53783 AC155922.1-201ENSMUST00000220100 373 ntBASIC4.93□□□□□ -1.62
Sox1P53783 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sox1P53783 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sox1P53783 Gm24457-201ENSMUST00000083196 105 ntBASIC4.93□□□□□ -1.62
Sox1P53783 Mir383-201ENSMUST00000083523 70 ntBASIC4.93□□□□□ -1.62
Sox1P53783 Mir132-201ENSMUST00000083603 66 ntBASIC4.93□□□□□ -1.62
Sox1P53783 Gm6361-201ENSMUST00000091031 435 ntBASIC4.93□□□□□ -1.62
Sox1P53783 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
Sox1P53783 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sox1P53783 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC4.93□□□□□ -1.62
Sox1P53783 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Sox1P53783 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Sox1P53783 Vmn1r6-207ENSMUST00000228285 7950 ntAPPRIS P2 BASIC4.93□□□□□ -1.62
Sox1P53783 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Sox1P53783 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Sox1P53783 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Sox1P53783 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Sox1P53783 Mnat1-202ENSMUST00000187549 3688 ntTSL 5 BASIC4.92□□□□□ -1.62
Sox1P53783 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Sox1P53783 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Sox1P53783 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Sox1P53783 B230217J21Rik-201ENSMUST00000218349 3896 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Sox1P53783 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Sox1P53783 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Sox1P53783 Olfr457-203ENSMUST00000204324 4275 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Sox1P53783 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Sox1P53783 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Sox1P53783 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Sox1P53783 Rnf128-202ENSMUST00000113027 2641 ntTSL 5 BASIC4.92□□□□□ -1.62
Sox1P53783 Gm15807-201ENSMUST00000119880 1128 ntBASIC4.92□□□□□ -1.62
Sox1P53783 Gm12686-201ENSMUST00000120546 397 ntBASIC4.92□□□□□ -1.62
Sox1P53783 Gm14732-201ENSMUST00000121372 545 ntBASIC4.92□□□□□ -1.62
Sox1P53783 Gm12785-201ENSMUST00000122052 172 ntBASIC4.92□□□□□ -1.62
Sox1P53783 n-R5s61-201ENSMUST00000122711 118 ntBASIC4.92□□□□□ -1.62
Sox1P53783 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Sox1P53783 Gm24191-201ENSMUST00000157977 122 ntBASIC4.92□□□□□ -1.62
Sox1P53783 Gm25714-201ENSMUST00000158626 296 ntBASIC4.92□□□□□ -1.62
Sox1P53783 Gm15647-201ENSMUST00000160178 691 ntTSL 3 BASIC4.92□□□□□ -1.62
Sox1P53783 Gm21991-201ENSMUST00000180006 508 ntBASIC4.92□□□□□ -1.62
Sox1P53783 Gm28747-201ENSMUST00000185366 571 ntTSL 5 BASIC4.92□□□□□ -1.62
Sox1P53783 Gm29012-201ENSMUST00000187882 469 ntTSL 3 BASIC4.92□□□□□ -1.62
Sox1P53783 Gm29352-201ENSMUST00000188054 544 ntBASIC4.92□□□□□ -1.62
Sox1P53783 Gm43304-201ENSMUST00000196803 326 ntBASIC4.92□□□□□ -1.62
Sox1P53783 Gm44322-201ENSMUST00000196830 115 ntBASIC4.92□□□□□ -1.62
Sox1P53783 Igkv13-64-201ENSMUST00000198143 343 ntBASIC4.92□□□□□ -1.62
Sox1P53783 Gm44171-201ENSMUST00000203701 2109 ntBASIC4.92□□□□□ -1.62
Sox1P53783 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC4.92□□□□□ -1.62
Sox1P53783 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC4.92□□□□□ -1.62
Sox1P53783 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Sox1P53783 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
Sox1P53783 Zbtb38-212ENSMUST00000152594 7406 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
Sox1P53783 Gm11251-201ENSMUST00000119593 2800 ntBASIC4.92□□□□□ -1.62
Sox1P53783 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Sox1P53783 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC4.92□□□□□ -1.62
Sox1P53783 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Sox1P53783 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Sox1P53783 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Sox1P53783 Gm6162-201ENSMUST00000194870 2930 ntBASIC4.92□□□□□ -1.62
Sox1P53783 Gm37766-201ENSMUST00000192244 2567 ntBASIC4.92□□□□□ -1.62
Sox1P53783 AC133079.1-201ENSMUST00000220943 1881 ntBASIC4.92□□□□□ -1.62
Sox1P53783 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Sox1P53783 Gm15088-201ENSMUST00000117973 1508 ntBASIC4.92□□□□□ -1.62
Sox1P53783 Gm15098-201ENSMUST00000119036 1508 ntBASIC4.92□□□□□ -1.62
Sox1P53783 AC155941.5-201ENSMUST00000218925 1505 ntTSL 5 BASIC4.92□□□□□ -1.62
Sox1P53783 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Sox1P53783 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Sox1P53783 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC4.92□□□□□ -1.62
Sox1P53783 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Sox1P53783 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
Sox1P53783 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Sox1P53783 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Sox1P53783 Ktn1-219ENSMUST00000190182 3984 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Sox1P53783 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.91□□□□□ -1.62
Sox1P53783 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.91□□□□□ -1.62
Sox1P53783 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sox1P53783 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sox1P53783 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sox1P53783 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
Sox1P53783 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sox1P53783 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sox1P53783 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Sox1P53783 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Sox1P53783 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Sox1P53783 Gm23422-201ENSMUST00000102000 107 ntBASIC4.91□□□□□ -1.62
Sox1P53783 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Sox1P53783 Gm15058-201ENSMUST00000117689 458 ntBASIC4.91□□□□□ -1.62
Sox1P53783 Gm11699-201ENSMUST00000119016 401 ntBASIC4.91□□□□□ -1.62
Sox1P53783 Platr27-201ENSMUST00000131365 629 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Sox1P53783 Gm24909-201ENSMUST00000157290 280 ntBASIC4.91□□□□□ -1.62
Sox1P53783 Gm22059-201ENSMUST00000157544 104 ntBASIC4.91□□□□□ -1.62
Sox1P53783 Gm23554-201ENSMUST00000157818 110 ntBASIC4.91□□□□□ -1.62
Sox1P53783 Gm24584-201ENSMUST00000157972 107 ntBASIC4.91□□□□□ -1.62
Sox1P53783 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC4.91□□□□□ -1.62
Sox1P53783 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Sox1P53783 Gm13249-201ENSMUST00000177803 345 ntBASIC4.91□□□□□ -1.62
Sox1P53783 Gm13144-201ENSMUST00000179385 345 ntBASIC4.91□□□□□ -1.62
Sox1P53783 Gm22286-201ENSMUST00000179708 107 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms