Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.9□□□□□ -1.78
Traf1P39428 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.78
Traf1P39428 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Traf1P39428 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Traf1P39428 Gm23691-201ENSMUST00000101878 107 ntBASIC3.9□□□□□ -1.79
Traf1P39428 Mir673-201ENSMUST00000102361 91 ntBASIC3.9□□□□□ -1.79
Traf1P39428 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Traf1P39428 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Traf1P39428 Gm24376-201ENSMUST00000104399 127 ntBASIC3.9□□□□□ -1.79
Traf1P39428 Gm14810-201ENSMUST00000121628 486 ntBASIC3.9□□□□□ -1.79
Traf1P39428 Etaa1os-202ENSMUST00000148496 388 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Traf1P39428 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.9□□□□□ -1.79
Traf1P39428 Gm23473-201ENSMUST00000158883 116 ntBASIC3.9□□□□□ -1.79
Traf1P39428 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Traf1P39428 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC3.9□□□□□ -1.79
Traf1P39428 Gm4175-201ENSMUST00000172863 945 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Traf1P39428 Gm4761-201ENSMUST00000178086 582 ntBASIC3.9□□□□□ -1.79
Traf1P39428 Gm22910-201ENSMUST00000178568 132 ntBASIC3.9□□□□□ -1.79
Traf1P39428 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Traf1P39428 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC3.9□□□□□ -1.79
Traf1P39428 Gm37288-201ENSMUST00000193963 334 ntBASIC3.9□□□□□ -1.79
Traf1P39428 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC3.9□□□□□ -1.79
Traf1P39428 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC3.9□□□□□ -1.79
Traf1P39428 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC3.9□□□□□ -1.79
Traf1P39428 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.9□□□□□ -1.79
Traf1P39428 AC174797.4-201ENSMUST00000225510 347 ntBASIC3.9□□□□□ -1.79
Traf1P39428 AC168062.2-201ENSMUST00000228907 422 ntBASIC3.9□□□□□ -1.79
Traf1P39428 Tas2r103-201ENSMUST00000032317 939 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Traf1P39428 Gm9765-201ENSMUST00000043170 321 ntBASIC3.9□□□□□ -1.79
Traf1P39428 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Traf1P39428 Gm10665-201ENSMUST00000098720 966 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Traf1P39428 Gm10666-201ENSMUST00000098722 966 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Traf1P39428 Vmn1r114-201ENSMUST00000098737 966 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Traf1P39428 Gm10670-201ENSMUST00000098744 966 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Traf1P39428 Vmn1r93-201ENSMUST00000098747 966 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Traf1P39428 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.9□□□□□ -1.79
Traf1P39428 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
Traf1P39428 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Traf1P39428 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.9□□□□□ -1.79
Traf1P39428 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.89□□□□□ -1.79
Traf1P39428 Olfr397-204ENSMUST00000216291 4168 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Traf1P39428 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
Traf1P39428 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Traf1P39428 Gm12782-201ENSMUST00000117519 727 ntBASIC3.89□□□□□ -1.79
Traf1P39428 Gm14253-201ENSMUST00000122112 639 ntBASIC3.89□□□□□ -1.79
Traf1P39428 Gm22516-201ENSMUST00000158266 124 ntBASIC3.89□□□□□ -1.79
Traf1P39428 Gm24968-201ENSMUST00000179817 107 ntBASIC3.89□□□□□ -1.79
Traf1P39428 Gm28917-201ENSMUST00000187294 237 ntBASIC3.89□□□□□ -1.79
Traf1P39428 Gm28785-201ENSMUST00000187478 379 ntBASIC3.89□□□□□ -1.79
Traf1P39428 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC3.89□□□□□ -1.79
Traf1P39428 Gm28766-201ENSMUST00000191086 234 ntBASIC3.89□□□□□ -1.79
Traf1P39428 Gm29740-201ENSMUST00000193182 655 ntBASIC3.89□□□□□ -1.79
Traf1P39428 Gm5551-201ENSMUST00000199720 690 ntBASIC3.89□□□□□ -1.79
Traf1P39428 Gm43239-201ENSMUST00000200131 201 ntBASIC3.89□□□□□ -1.79
Traf1P39428 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Traf1P39428 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
Traf1P39428 Gm18729-201ENSMUST00000217230 621 ntBASIC3.89□□□□□ -1.79
Traf1P39428 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC3.89□□□□□ -1.79
Traf1P39428 AC153977.1-201ENSMUST00000219416 506 ntTSL 5 BASIC3.89□□□□□ -1.79
Traf1P39428 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.89□□□□□ -1.79
Traf1P39428 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Traf1P39428 AC125523.1-201ENSMUST00000228018 934 ntBASIC3.89□□□□□ -1.79
Traf1P39428 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Traf1P39428 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.89□□□□□ -1.79
Traf1P39428 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Traf1P39428 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.88□□□□□ -1.79
Traf1P39428 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.88□□□□□ -1.79
Traf1P39428 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.88□□□□□ -1.79
Traf1P39428 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Traf1P39428 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Traf1P39428 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Traf1P39428 Gm11577-201ENSMUST00000118030 737 ntBASIC3.88□□□□□ -1.79
Traf1P39428 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.88□□□□□ -1.79
Traf1P39428 Gm14669-201ENSMUST00000118841 250 ntBASIC3.88□□□□□ -1.79
Traf1P39428 Gm12858-201ENSMUST00000121913 208 ntBASIC3.88□□□□□ -1.79
Traf1P39428 Gm14713-201ENSMUST00000122362 686 ntBASIC3.88□□□□□ -1.79
Traf1P39428 Gm15733-201ENSMUST00000132957 242 ntBASIC3.88□□□□□ -1.79
Traf1P39428 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.88□□□□□ -1.79
Traf1P39428 Gm25967-201ENSMUST00000157168 147 ntBASIC3.88□□□□□ -1.79
Traf1P39428 Gm23028-201ENSMUST00000158773 265 ntBASIC3.88□□□□□ -1.79
Traf1P39428 Mir3106-201ENSMUST00000175401 82 ntBASIC3.88□□□□□ -1.79
Traf1P39428 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.88□□□□□ -1.79
Traf1P39428 Gm25198-201ENSMUST00000178574 110 ntBASIC3.88□□□□□ -1.79
Traf1P39428 Gm37213-201ENSMUST00000193077 586 ntBASIC3.88□□□□□ -1.79
Traf1P39428 Gm43541-201ENSMUST00000197208 581 ntBASIC3.88□□□□□ -1.79
Traf1P39428 Gm9712-201ENSMUST00000210842 311 ntBASIC3.88□□□□□ -1.79
Traf1P39428 Gm45814-201ENSMUST00000212646 775 ntBASIC3.88□□□□□ -1.79
Traf1P39428 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.88□□□□□ -1.79
Traf1P39428 AC145736.1-201ENSMUST00000214661 479 ntBASIC3.88□□□□□ -1.79
Traf1P39428 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.88□□□□□ -1.79
Traf1P39428 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.88□□□□□ -1.79
Traf1P39428 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.88□□□□□ -1.79
Traf1P39428 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Traf1P39428 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Traf1P39428 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
Traf1P39428 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.88□□□□□ -1.79
Traf1P39428 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
Traf1P39428 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.88□□□□□ -1.79
Traf1P39428 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Traf1P39428 Gm23175-201ENSMUST00000104371 132 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms