Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
Col1a1P11087 Gm11253-201ENSMUST00000118486 201 ntBASIC2.62□□□□□ -1.99
Col1a1P11087 Gm15643-201ENSMUST00000126556 383 ntTSL 3 BASIC2.62□□□□□ -1.99
Col1a1P11087 Gm23223-201ENSMUST00000158119 127 ntBASIC2.62□□□□□ -1.99
Col1a1P11087 Gm2691-201ENSMUST00000203205 901 ntBASIC2.62□□□□□ -1.99
Col1a1P11087 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.62□□□□□ -1.99
Col1a1P11087 Gm45652-201ENSMUST00000210926 3831 ntBASIC2.62□□□□□ -1.99
Col1a1P11087 Gm3690-201ENSMUST00000211341 262 ntBASIC2.62□□□□□ -1.99
Col1a1P11087 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC2.62□□□□□ -1.99
Col1a1P11087 AC211878.5-201ENSMUST00000221697 409 ntBASIC2.62□□□□□ -1.99
Col1a1P11087 Gm43473-201ENSMUST00000200442 5997 ntBASIC2.62□□□□□ -1.99
Col1a1P11087 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
Col1a1P11087 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Col1a1P11087 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
Col1a1P11087 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Col1a1P11087 Gm25421-201ENSMUST00000104218 164 ntBASIC2.61□□□□□ -1.99
Col1a1P11087 Gm13471-201ENSMUST00000122057 433 ntBASIC2.61□□□□□ -1.99
Col1a1P11087 Gm14804-201ENSMUST00000122322 508 ntBASIC2.61□□□□□ -1.99
Col1a1P11087 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Col1a1P11087 Gm23289-201ENSMUST00000175615 108 ntBASIC2.61□□□□□ -1.99
Col1a1P11087 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC2.61□□□□□ -1.99
Col1a1P11087 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.61□□□□□ -1.99
Col1a1P11087 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC2.61□□□□□ -1.99
Col1a1P11087 Gm7214-201ENSMUST00000222428 272 ntBASIC2.61□□□□□ -1.99
Col1a1P11087 Gm2544-201ENSMUST00000222702 756 ntBASIC2.61□□□□□ -1.99
Col1a1P11087 AC167013.2-202ENSMUST00000227035 333 ntBASIC2.61□□□□□ -1.99
Col1a1P11087 AC137902.2-201ENSMUST00000227989 576 ntBASIC2.61□□□□□ -1.99
Col1a1P11087 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Col1a1P11087 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Col1a1P11087 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Col1a1P11087 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Col1a1P11087 Gm13687-201ENSMUST00000119857 282 ntBASIC2.6□□□□□ -1.99
Col1a1P11087 Gm23043-201ENSMUST00000157890 109 ntBASIC2.6□□□□□ -1.99
Col1a1P11087 Gm26171-201ENSMUST00000158422 131 ntBASIC2.6□□□□□ -1.99
Col1a1P11087 Gm2389-201ENSMUST00000160487 189 ntBASIC2.6□□□□□ -1.99
Col1a1P11087 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Col1a1P11087 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC2.6□□□□□ -1.99
Col1a1P11087 Gm27163-201ENSMUST00000184767 409 ntBASIC2.6□□□□□ -1.99
Col1a1P11087 Gm37732-201ENSMUST00000194377 316 ntBASIC2.6□□□□□ -1.99
Col1a1P11087 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.6□□□□□ -1.99
Col1a1P11087 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.6□□□□□ -1.99
Col1a1P11087 AC105407.3-201ENSMUST00000224161 648 ntBASIC2.6□□□□□ -1.99
Col1a1P11087 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
Col1a1P11087 Gm26922-201ENSMUST00000082687 72 ntBASIC2.6□□□□□ -1.99
Col1a1P11087 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Col1a1P11087 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
Col1a1P11087 Klra10-201ENSMUST00000112020 823 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Col1a1P11087 Gm12205-201ENSMUST00000133940 575 ntTSL 5 BASIC2.59□□□□□ -1.99
Col1a1P11087 Gm25910-201ENSMUST00000157620 140 ntBASIC2.59□□□□□ -1.99
Col1a1P11087 Gm24237-201ENSMUST00000157790 132 ntBASIC2.59□□□□□ -1.99
Col1a1P11087 Gm27443-201ENSMUST00000184660 98 ntBASIC2.59□□□□□ -1.99
Col1a1P11087 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC2.59□□□□□ -1.99
Col1a1P11087 Gm42818-201ENSMUST00000198869 987 ntBASIC2.59□□□□□ -1.99
Col1a1P11087 Gm44703-201ENSMUST00000205724 248 ntBASIC2.59□□□□□ -1.99
Col1a1P11087 AC138401.1-201ENSMUST00000221533 116 ntBASIC2.59□□□□□ -1.99
Col1a1P11087 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC2.59□□□□□ -1.99
Col1a1P11087 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Col1a1P11087 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Col1a1P11087 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Col1a1P11087 n-R5s220-201ENSMUST00000082926 120 ntBASIC2.59□□□□□ -1.99
Col1a1P11087 Gm10212-201ENSMUST00000087884 324 ntBASIC2.59□□□□□ -1.99
Col1a1P11087 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC2.59□□□□□ -1.99
Col1a1P11087 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.59□□□□□ -2
Col1a1P11087 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Col1a1P11087 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.58□□□□□ -2
Col1a1P11087 Gm15846-201ENSMUST00000116022 320 ntBASIC2.58□□□□□ -2
Col1a1P11087 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC2.58□□□□□ -2
Col1a1P11087 Gm13743-201ENSMUST00000121486 724 ntBASIC2.58□□□□□ -2
Col1a1P11087 Gm13868-201ENSMUST00000122411 294 ntBASIC2.58□□□□□ -2
Col1a1P11087 Gm17177-201ENSMUST00000169144 483 ntBASIC2.58□□□□□ -2
Col1a1P11087 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC2.58□□□□□ -2
Col1a1P11087 Gm24317-201ENSMUST00000178536 107 ntBASIC2.58□□□□□ -2
Col1a1P11087 Gm27608-201ENSMUST00000184822 162 ntBASIC2.58□□□□□ -2
Col1a1P11087 Gm21489-201ENSMUST00000189668 818 ntBASIC2.58□□□□□ -2
Col1a1P11087 Gm28466-201ENSMUST00000190678 659 ntBASIC2.58□□□□□ -2
Col1a1P11087 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC2.58□□□□□ -2
Col1a1P11087 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC2.58□□□□□ -2
Col1a1P11087 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC2.58□□□□□ -2
Col1a1P11087 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC2.58□□□□□ -2
Col1a1P11087 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC2.58□□□□□ -2
Col1a1P11087 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.58□□□□□ -2
Col1a1P11087 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Col1a1P11087 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Col1a1P11087 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Col1a1P11087 Gm25460-201ENSMUST00000157954 127 ntBASIC2.58□□□□□ -2
Col1a1P11087 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.58□□□□□ -2
Col1a1P11087 Gm18595-201ENSMUST00000175736 1068 ntBASIC2.58□□□□□ -2
Col1a1P11087 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC2.58□□□□□ -2
Col1a1P11087 Gm27160-201ENSMUST00000184837 199 ntBASIC2.58□□□□□ -2
Col1a1P11087 Gm28627-201ENSMUST00000186141 453 ntBASIC2.58□□□□□ -2
Col1a1P11087 Gm32175-201ENSMUST00000193641 346 ntBASIC2.58□□□□□ -2
Col1a1P11087 AC162376.1-201ENSMUST00000220120 435 ntBASIC2.58□□□□□ -2
Col1a1P11087 AC126554.4-201ENSMUST00000221055 409 ntBASIC2.58□□□□□ -2
Col1a1P11087 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC2.58□□□□□ -2
Col1a1P11087 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Col1a1P11087 Gm43046-201ENSMUST00000198771 2451 ntBASIC2.57□□□□□ -2
Col1a1P11087 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC2.57□□□□□ -2
Col1a1P11087 Gm43662-201ENSMUST00000198310 2271 ntBASIC2.57□□□□□ -2
Col1a1P11087 Gm43882-201ENSMUST00000204871 2264 ntBASIC2.57□□□□□ -2
Col1a1P11087 Gm13314-201ENSMUST00000118742 335 ntBASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms