Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Gm10552-201ENSMUST00000113396 372 ntBASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Gm11576-201ENSMUST00000117433 417 ntBASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Gm15844-201ENSMUST00000118016 576 ntBASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Gm13122-201ENSMUST00000118380 453 ntBASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Gm7327-201ENSMUST00000120925 652 ntBASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Gm12087-201ENSMUST00000121878 258 ntBASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Gm22106-201ENSMUST00000122544 127 ntBASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Gm22059-201ENSMUST00000157544 104 ntBASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Gm22968-201ENSMUST00000157955 118 ntBASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Mir3090-201ENSMUST00000175597 87 ntBASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Gm9830-201ENSMUST00000178509 357 ntBASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Gm43408-201ENSMUST00000198263 440 ntBASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Gm4734-201ENSMUST00000200117 777 ntBASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Gm7825-201ENSMUST00000204046 416 ntBASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Gm18850-201ENSMUST00000211578 388 ntBASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Gm25187-201ENSMUST00000083906 133 ntBASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Lin28b-201ENSMUST00000079390 5402 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Gm5362-201ENSMUST00000211968 3085 ntBASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.23□□□□□ -1.73
Pcdh1F7BJK1 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm17969-201ENSMUST00000185706 2557 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm24338-201ENSMUST00000104205 127 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Vmn1r124-201ENSMUST00000105200 924 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm13664-201ENSMUST00000117304 345 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm14868-201ENSMUST00000117840 216 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm11490-201ENSMUST00000118128 272 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm11804-201ENSMUST00000121663 468 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm23537-201ENSMUST00000157536 330 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm22849-201ENSMUST00000157713 307 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm23496-201ENSMUST00000157741 248 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Arhgap39-209ENSMUST00000177026 371 ntTSL 5 BASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm29512-201ENSMUST00000185544 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm28110-201ENSMUST00000185782 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm28838-201ENSMUST00000186338 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm29057-201ENSMUST00000186468 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm29661-201ENSMUST00000186781 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm28737-201ENSMUST00000186808 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm29118-201ENSMUST00000186908 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm28433-201ENSMUST00000187085 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm29635-201ENSMUST00000187221 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm28759-201ENSMUST00000187621 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm28831-201ENSMUST00000187739 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm28200-201ENSMUST00000187778 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm29026-201ENSMUST00000187787 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm28752-201ENSMUST00000188340 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm28797-201ENSMUST00000188543 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm28855-201ENSMUST00000188680 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm29378-201ENSMUST00000188723 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm28569-201ENSMUST00000188748 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm28120-201ENSMUST00000188812 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm28369-201ENSMUST00000188993 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm29037-201ENSMUST00000189092 313 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm28909-201ENSMUST00000189406 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm28705-201ENSMUST00000189548 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm28861-201ENSMUST00000189681 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm29180-201ENSMUST00000190003 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm28939-201ENSMUST00000190351 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm28223-201ENSMUST00000190469 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm29575-201ENSMUST00000190597 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm29092-201ENSMUST00000190768 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm19498-201ENSMUST00000191128 331 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm28822-201ENSMUST00000191140 778 ntTSL 5 BASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm29469-201ENSMUST00000191448 315 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm43724-201ENSMUST00000197516 226 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm45150-201ENSMUST00000206051 467 ntBASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC4.22□□□□□ -1.73
Pcdh1F7BJK1 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC4.22□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 113.2 ms