Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Gm44727-201ENSMUST00000204225 451 ntBASIC1.96□□□□□ -2.1
Trav6-6A0A075B603 Gm45192-201ENSMUST00000206749 283 ntBASIC1.96□□□□□ -2.1
Trav6-6A0A075B603 Gm45316-201ENSMUST00000210128 162 ntBASIC1.96□□□□□ -2.1
Trav6-6A0A075B603 Gm45513-201ENSMUST00000210228 376 ntBASIC1.96□□□□□ -2.1
Trav6-6A0A075B603 Gm19232-201ENSMUST00000211621 652 ntBASIC1.96□□□□□ -2.1
Trav6-6A0A075B603 AC134577.1-201ENSMUST00000227572 295 ntBASIC1.96□□□□□ -2.1
Trav6-6A0A075B603 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Trav6-6A0A075B603 AC153526.2-201ENSMUST00000218206 2031 ntBASIC1.96□□□□□ -2.1
Trav6-6A0A075B603 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Trav6-6A0A075B603 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
Trav6-6A0A075B603 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC1.96□□□□□ -2.1
Trav6-6A0A075B603 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Gm23911-201ENSMUST00000104596 134 ntBASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Gm16400-201ENSMUST00000116523 1029 ntBASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Gm12392-201ENSMUST00000118014 938 ntBASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Gm16100-201ENSMUST00000120489 231 ntBASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Gm14736-201ENSMUST00000121470 336 ntBASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Gm23886-201ENSMUST00000122684 313 ntBASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Gm22563-201ENSMUST00000157333 269 ntBASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Gm24138-201ENSMUST00000157572 114 ntBASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Mir1927-201ENSMUST00000158579 109 ntBASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Gm23268-201ENSMUST00000175494 78 ntBASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Gm27921-201ENSMUST00000183968 108 ntBASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Gm27698-201ENSMUST00000184060 249 ntBASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Gm19641-201ENSMUST00000188432 417 ntBASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Fasl-202ENSMUST00000193648 406 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Gm37676-201ENSMUST00000195496 507 ntBASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Gm6615-201ENSMUST00000199426 631 ntBASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Gm43478-201ENSMUST00000200381 292 ntBASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 AC126043.1-201ENSMUST00000221304 1141 ntBASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 AC147639.1-201ENSMUST00000224216 661 ntBASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Gm42659-201ENSMUST00000196955 1754 ntBASIC1.95□□□□□ -2.1
Trav6-6A0A075B603 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 AC157570.1-201ENSMUST00000218052 3778 ntBASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Mir673-201ENSMUST00000102361 91 ntBASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Gm25728-201ENSMUST00000104525 159 ntBASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Gm12693-201ENSMUST00000121965 483 ntBASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Gm13274-202ENSMUST00000137624 271 ntTSL 3 BASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Gm22794-201ENSMUST00000157228 306 ntBASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Gm22947-201ENSMUST00000158559 91 ntBASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Gm24082-201ENSMUST00000175175 83 ntBASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Gm20673-201ENSMUST00000177167 430 ntBASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Gm37037-201ENSMUST00000194475 424 ntBASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Gm43722-201ENSMUST00000196054 124 ntBASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Gm43626-201ENSMUST00000198575 162 ntBASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Gm42516-201ENSMUST00000198691 767 ntBASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Gm18855-201ENSMUST00000206689 570 ntBASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 AC155923.1-201ENSMUST00000215676 356 ntBASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 AC153924.1-201ENSMUST00000220117 312 ntBASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Gnrh1-202ENSMUST00000223929 428 ntBASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Olfr478-201ENSMUST00000049719 945 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Gm25810-201ENSMUST00000082752 108 ntBASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Gm24446-201ENSMUST00000083982 156 ntBASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Gm42479-201ENSMUST00000198654 1356 ntBASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Gm43230-201ENSMUST00000200980 2129 ntBASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Trav6-6A0A075B603 Olfr844-202ENSMUST00000220268 1686 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Trav6-6A0A075B603 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC1.93□□□□□ -2.1
Trav6-6A0A075B603 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
Trav6-6A0A075B603 Gm22019-201ENSMUST00000104359 96 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 86.4 ms