Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm5558-201ENSMUST00000178933 495 ntBASIC4.82□□□□□ -1.64
Trim39Q9ESN2 Mir6539-201ENSMUST00000183732 110 ntBASIC4.82□□□□□ -1.64
Trim39Q9ESN2 Mir6417-201ENSMUST00000183815 116 ntBASIC4.82□□□□□ -1.64
Trim39Q9ESN2 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim39Q9ESN2 Gm42990-201ENSMUST00000199231 312 ntBASIC4.82□□□□□ -1.64
Trim39Q9ESN2 Gm18540-201ENSMUST00000204025 526 ntBASIC4.82□□□□□ -1.64
Trim39Q9ESN2 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim39Q9ESN2 AC171206.2-201ENSMUST00000215252 389 ntBASIC4.82□□□□□ -1.64
Trim39Q9ESN2 Gm18409-202ENSMUST00000220105 529 ntBASIC4.82□□□□□ -1.64
Trim39Q9ESN2 AC174797.2-203ENSMUST00000224017 716 ntBASIC4.82□□□□□ -1.64
Trim39Q9ESN2 AC129017.1-201ENSMUST00000228363 270 ntBASIC4.82□□□□□ -1.64
Trim39Q9ESN2 Gm6065-201ENSMUST00000081336 492 ntBASIC4.82□□□□□ -1.64
Trim39Q9ESN2 Gm23511-201ENSMUST00000083084 164 ntBASIC4.82□□□□□ -1.64
Trim39Q9ESN2 Gm22155-201ENSMUST00000083836 162 ntBASIC4.82□□□□□ -1.64
Trim39Q9ESN2 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim39Q9ESN2 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim39Q9ESN2 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Trim39Q9ESN2 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.82□□□□□ -1.64
Trim39Q9ESN2 Vmn1r14-203ENSMUST00000227574 7394 ntAPPRIS ALT2 BASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Gm18852-201ENSMUST00000184149 3593 ntBASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Smc5-206ENSMUST00000226111 3265 ntBASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Olfr612-203ENSMUST00000215663 2473 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Gm39043-201ENSMUST00000207602 2081 ntTSL 5 BASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Gm13355-201ENSMUST00000117996 317 ntBASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Gm11429-201ENSMUST00000119089 144 ntBASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Gm24629-201ENSMUST00000122762 89 ntBASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC4.81□□□□□ -1.64
Trim39Q9ESN2 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Gm25384-201ENSMUST00000157807 105 ntBASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Gm27510-201ENSMUST00000158214 64 ntBASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Mir3097-201ENSMUST00000175356 67 ntBASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Gm16378-201ENSMUST00000179168 342 ntBASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Gm21816-201ENSMUST00000179255 360 ntBASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Gm27608-201ENSMUST00000184822 162 ntBASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Gm29062-201ENSMUST00000186032 694 ntBASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Gm2914-201ENSMUST00000186120 328 ntBASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Gm28534-201ENSMUST00000187744 676 ntBASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Gm38670-201ENSMUST00000199248 77 ntBASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Gm42666-201ENSMUST00000201954 152 ntBASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Gm44371-201ENSMUST00000204148 467 ntBASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Gm19790-201ENSMUST00000214414 251 ntBASIC4.81□□□□□ -1.64
Trim39Q9ESN2 AC166902.1-201ENSMUST00000216653 517 ntBASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Gm18904-201ENSMUST00000218756 329 ntBASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Gm5265-201ENSMUST00000076828 342 ntBASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Gm23677-201ENSMUST00000083156 104 ntBASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Gm22744-201ENSMUST00000083444 65 ntBASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Olfr47-202ENSMUST00000215569 1603 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim39Q9ESN2 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim39Q9ESN2 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Gm44821-201ENSMUST00000208212 2002 ntBASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Trim39Q9ESN2 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Gm43281-201ENSMUST00000202522 2704 ntBASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Gm23705-201ENSMUST00000104370 130 ntBASIC4.8□□□□□ -1.64
Trim39Q9ESN2 H2al1n-201ENSMUST00000105137 514 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Gm14877-201ENSMUST00000119803 478 ntBASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Gm12413-201ENSMUST00000121508 312 ntBASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Gm24630-201ENSMUST00000122768 106 ntBASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Gm20534-201ENSMUST00000172957 172 ntBASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Gm27960-201ENSMUST00000183445 184 ntBASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Gm27409-201ENSMUST00000184727 80 ntBASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Gm27781-201ENSMUST00000185185 92 ntBASIC4.8□□□□□ -1.64
Trim39Q9ESN2 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Gm6651-201ENSMUST00000189471 271 ntBASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Gm28920-201ENSMUST00000189957 699 ntBASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Gm43284-201ENSMUST00000200103 253 ntBASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Gm42643-201ENSMUST00000200504 279 ntBASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Gm2059-201ENSMUST00000212025 287 ntBASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Gm30624-201ENSMUST00000220039 628 ntTSL 3 BASIC4.8□□□□□ -1.64
Trim39Q9ESN2 AC211878.2-201ENSMUST00000222486 488 ntBASIC4.8□□□□□ -1.64
Trim39Q9ESN2 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Gm9202-201ENSMUST00000223036 437 ntBASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trim39Q9ESN2 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Olfr1104-203ENSMUST00000215972 2797 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Gm45222-201ENSMUST00000207029 4307 ntBASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.8□□□□□ -1.64
Trim39Q9ESN2 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.79□□□□□ -1.64
Trim39Q9ESN2 AC116726.1-201ENSMUST00000215028 3497 ntBASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Gm8402-201ENSMUST00000118183 1770 ntBASIC4.79□□□□□ -1.64
Trim39Q9ESN2 Gm8383-201ENSMUST00000121179 1770 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms