Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Trim56Q80VI1 Olfr1507-203ENSMUST00000206062 2803 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Trim56Q80VI1 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Trim56Q80VI1 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Trim56Q80VI1 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC5.23□□□□□ -1.57
Trim56Q80VI1 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC5.23□□□□□ -1.57
Trim56Q80VI1 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Trim56Q80VI1 Gm26102-201ENSMUST00000157251 284 ntBASIC5.23□□□□□ -1.57
Trim56Q80VI1 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC5.23□□□□□ -1.57
Trim56Q80VI1 Gm5058-201ENSMUST00000187331 463 ntBASIC5.23□□□□□ -1.57
Trim56Q80VI1 Gm20203-201ENSMUST00000192352 332 ntBASIC5.23□□□□□ -1.57
Trim56Q80VI1 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC5.23□□□□□ -1.57
Trim56Q80VI1 Kcnmb2-206ENSMUST00000194796 338 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Trim56Q80VI1 Gm43393-201ENSMUST00000200147 194 ntBASIC5.23□□□□□ -1.57
Trim56Q80VI1 Kap-202ENSMUST00000203168 464 ntAPPRIS ALT2 TSL 3 BASIC5.23□□□□□ -1.57
Trim56Q80VI1 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC5.23□□□□□ -1.57
Trim56Q80VI1 Gm18306-201ENSMUST00000207338 569 ntBASIC5.23□□□□□ -1.57
Trim56Q80VI1 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC5.23□□□□□ -1.57
Trim56Q80VI1 Gm45730-201ENSMUST00000212560 395 ntBASIC5.23□□□□□ -1.57
Trim56Q80VI1 AC239878.1-201ENSMUST00000224212 506 ntBASIC5.23□□□□□ -1.57
Trim56Q80VI1 AC174459.2-201ENSMUST00000226036 160 ntBASIC5.23□□□□□ -1.57
Trim56Q80VI1 Gm25937-201ENSMUST00000083912 107 ntBASIC5.23□□□□□ -1.57
Trim56Q80VI1 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Trim56Q80VI1 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Trim56Q80VI1 Gm5117-201ENSMUST00000178878 2553 ntBASIC5.23□□□□□ -1.57
Trim56Q80VI1 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Trim56Q80VI1 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
Trim56Q80VI1 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Trim56Q80VI1 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Trim56Q80VI1 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Trim56Q80VI1 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Trim56Q80VI1 Gm44822-201ENSMUST00000208559 6389 ntBASIC5.22□□□□□ -1.57
Trim56Q80VI1 Gm17969-201ENSMUST00000185706 2557 ntBASIC5.22□□□□□ -1.57
Trim56Q80VI1 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Trim56Q80VI1 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC5.22□□□□□ -1.57
Trim56Q80VI1 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Trim56Q80VI1 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Trim56Q80VI1 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Trim56Q80VI1 Mir680-3-201ENSMUST00000102298 87 ntBASIC5.22□□□□□ -1.57
Trim56Q80VI1 Mir667-201ENSMUST00000102441 92 ntBASIC5.22□□□□□ -1.57
Trim56Q80VI1 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Trim56Q80VI1 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Trim56Q80VI1 Gm24079-201ENSMUST00000104352 132 ntBASIC5.22□□□□□ -1.57
Trim56Q80VI1 Mir105-201ENSMUST00000104655 80 ntBASIC5.22□□□□□ -1.57
Trim56Q80VI1 Gm14622-201ENSMUST00000117117 468 ntBASIC5.22□□□□□ -1.57
Trim56Q80VI1 Gm12509-201ENSMUST00000118033 609 ntBASIC5.22□□□□□ -1.57
Trim56Q80VI1 Gm14688-201ENSMUST00000119169 303 ntBASIC5.22□□□□□ -1.57
Trim56Q80VI1 Gm3191-201ENSMUST00000167139 346 ntBASIC5.22□□□□□ -1.57
Trim56Q80VI1 Gm3027-201ENSMUST00000167579 451 ntBASIC5.22□□□□□ -1.57
Trim56Q80VI1 Gm3104-201ENSMUST00000171004 473 ntBASIC5.22□□□□□ -1.57
Trim56Q80VI1 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Trim56Q80VI1 Gm42830-201ENSMUST00000196642 313 ntBASIC5.22□□□□□ -1.57
Trim56Q80VI1 AC153526.4-201ENSMUST00000217713 379 ntBASIC5.22□□□□□ -1.57
Trim56Q80VI1 AC135019.1-201ENSMUST00000219949 307 ntBASIC5.22□□□□□ -1.57
Trim56Q80VI1 AC154271.1-201ENSMUST00000224780 383 ntBASIC5.22□□□□□ -1.57
Trim56Q80VI1 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Trim56Q80VI1 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Trim56Q80VI1 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Trim56Q80VI1 Gm43605-201ENSMUST00000199663 3426 ntBASIC5.22□□□□□ -1.57
Trim56Q80VI1 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Trim56Q80VI1 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Trim56Q80VI1 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Trim56Q80VI1 Gm37916-201ENSMUST00000192153 2435 ntBASIC5.22□□□□□ -1.57
Trim56Q80VI1 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
Trim56Q80VI1 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Trim56Q80VI1 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
Trim56Q80VI1 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC5.21□□□□□ -1.57
Trim56Q80VI1 Gm42876-201ENSMUST00000196989 3215 ntBASIC5.21□□□□□ -1.58
Trim56Q80VI1 Mir92b-201ENSMUST00000102300 83 ntBASIC5.21□□□□□ -1.58
Trim56Q80VI1 Gm14304-201ENSMUST00000117272 446 ntBASIC5.21□□□□□ -1.58
Trim56Q80VI1 Gm11325-201ENSMUST00000119967 469 ntBASIC5.21□□□□□ -1.58
Trim56Q80VI1 Gm13511-201ENSMUST00000121167 363 ntBASIC5.21□□□□□ -1.58
Trim56Q80VI1 Gm12226-201ENSMUST00000144172 876 ntBASIC5.21□□□□□ -1.58
Trim56Q80VI1 Gm16358-201ENSMUST00000146046 210 ntBASIC5.21□□□□□ -1.58
Trim56Q80VI1 Gm16250-201ENSMUST00000148974 256 ntBASIC5.21□□□□□ -1.58
Trim56Q80VI1 Gm24504-201ENSMUST00000157679 100 ntBASIC5.21□□□□□ -1.58
Trim56Q80VI1 Gm25264-201ENSMUST00000158519 117 ntBASIC5.21□□□□□ -1.58
Trim56Q80VI1 Gm24415-201ENSMUST00000180218 107 ntBASIC5.21□□□□□ -1.58
Trim56Q80VI1 Gm27796-201ENSMUST00000183863 261 ntBASIC5.21□□□□□ -1.58
Trim56Q80VI1 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC5.21□□□□□ -1.58
Trim56Q80VI1 Gm9238-201ENSMUST00000196181 329 ntBASIC5.21□□□□□ -1.58
Trim56Q80VI1 Gm5876-201ENSMUST00000203735 243 ntBASIC5.21□□□□□ -1.58
Trim56Q80VI1 Gm19726-201ENSMUST00000205008 240 ntBASIC5.21□□□□□ -1.58
Trim56Q80VI1 AL450317.1-201ENSMUST00000213941 291 ntBASIC5.21□□□□□ -1.58
Trim56Q80VI1 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC5.21□□□□□ -1.58
Trim56Q80VI1 CT009718.4-201ENSMUST00000221881 109 ntBASIC5.21□□□□□ -1.58
Trim56Q80VI1 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC5.21□□□□□ -1.58
Trim56Q80VI1 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC5.21□□□□□ -1.58
Trim56Q80VI1 Gm23464-201ENSMUST00000083145 147 ntBASIC5.21□□□□□ -1.58
Trim56Q80VI1 Gm42616-201ENSMUST00000198989 4184 ntBASIC5.21□□□□□ -1.58
Trim56Q80VI1 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC5.21□□□□□ -1.58
Trim56Q80VI1 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Trim56Q80VI1 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Trim56Q80VI1 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Trim56Q80VI1 Gm43648-201ENSMUST00000197775 2485 ntBASIC5.21□□□□□ -1.58
Trim56Q80VI1 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC5.21□□□□□ -1.58
Trim56Q80VI1 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Trim56Q80VI1 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC5.21□□□□□ -1.58
Trim56Q80VI1 Gm37696-201ENSMUST00000194223 3349 ntBASIC5.21□□□□□ -1.58
Trim56Q80VI1 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms