Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Olfr1180-202ENSMUST00000216121 2079 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Gm17752-201ENSMUST00000185787 3726 ntBASIC3.96□□□□□ -1.78
Ubfd1Q78JW9 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm43896-201ENSMUST00000203440 2032 ntBASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Ghr-208ENSMUST00000161561 2749 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm38240-201ENSMUST00000195110 2487 ntBASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm44435-201ENSMUST00000204379 4119 ntBASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm24608-201ENSMUST00000104381 136 ntBASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm12427-201ENSMUST00000117719 302 ntBASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm6797-201ENSMUST00000119440 512 ntBASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm14586-201ENSMUST00000119571 408 ntBASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm7219-201ENSMUST00000119619 297 ntBASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm14049-201ENSMUST00000121009 636 ntBASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm23098-201ENSMUST00000157552 299 ntBASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Mir5101-201ENSMUST00000175181 83 ntBASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm18588-201ENSMUST00000177308 492 ntBASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm23144-201ENSMUST00000180226 107 ntBASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm36934-201ENSMUST00000192007 306 ntBASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm19694-201ENSMUST00000192364 505 ntBASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm37701-201ENSMUST00000192947 1100 ntBASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm19908-201ENSMUST00000204684 391 ntBASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm45539-201ENSMUST00000210313 428 ntBASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm19572-201ENSMUST00000214326 338 ntBASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm7495-201ENSMUST00000215099 426 ntBASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm4921-201ENSMUST00000219804 992 ntBASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm22572-201ENSMUST00000082985 105 ntBASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm8744-201ENSMUST00000204475 3581 ntBASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Lipo5-201ENSMUST00000156818 2003 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm43924-201ENSMUST00000204851 1736 ntBASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.95□□□□□ -1.78
Ubfd1Q78JW9 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm42717-201ENSMUST00000197309 3463 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 AC152162.1-201ENSMUST00000225910 2917 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm12492-201ENSMUST00000117665 564 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm14867-201ENSMUST00000120156 866 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm6565-201ENSMUST00000121217 438 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 n-R5s45-201ENSMUST00000122592 110 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm11281-201ENSMUST00000141391 576 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm23078-201ENSMUST00000157848 148 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm23365-201ENSMUST00000175019 125 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm25960-201ENSMUST00000175110 125 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm44453-201ENSMUST00000175161 126 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm25195-201ENSMUST00000177656 126 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm23816-201ENSMUST00000179617 132 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm6651-201ENSMUST00000189471 271 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm19774-201ENSMUST00000190667 114 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm29740-201ENSMUST00000193182 655 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm38329-201ENSMUST00000193473 427 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm38109-201ENSMUST00000195386 181 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm34091-201ENSMUST00000200875 604 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm44016-201ENSMUST00000203463 164 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm19366-201ENSMUST00000206996 156 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm44609-201ENSMUST00000207157 460 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm45400-201ENSMUST00000211603 653 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 Gm17829-201ENSMUST00000219782 344 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.94□□□□□ -1.78
Ubfd1Q78JW9 AC123656.2-201ENSMUST00000226726 227 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms