Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm26960-201ENSMUST00000182263 412 ntBASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Gm27189-201ENSMUST00000184119 190 ntBASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Gm29408-201ENSMUST00000187536 216 ntBASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Gm29460-201ENSMUST00000188607 714 ntBASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Gm43393-201ENSMUST00000200147 194 ntBASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Gm33501-202ENSMUST00000209983 706 ntTSL 5 BASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Gm45614-201ENSMUST00000209994 721 ntBASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 AC168059.2-201ENSMUST00000224473 333 ntBASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Gm14404-201ENSMUST00000119117 1660 ntBASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Gm43718-201ENSMUST00000197524 1857 ntBASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Trav3-3Q5R1C3 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Gm24119-201ENSMUST00000103979 246 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Gm13329-201ENSMUST00000117063 265 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Mup-ps15-201ENSMUST00000121741 539 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Gm25945-201ENSMUST00000122484 135 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 n-R5s68-201ENSMUST00000122639 82 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Gm22613-201ENSMUST00000122679 292 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Gm22310-201ENSMUST00000157509 116 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Gm25605-201ENSMUST00000158364 124 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Gm24736-201ENSMUST00000158862 130 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Gm16236-201ENSMUST00000159588 379 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Gm16289-201ENSMUST00000162079 183 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Mir713-201ENSMUST00000178651 108 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Gm8649-201ENSMUST00000181799 233 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Mir3620-201ENSMUST00000184710 61 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Gm7858-201ENSMUST00000190177 622 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Gm29704-201ENSMUST00000196011 253 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Gm42828-201ENSMUST00000199669 469 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Gm43979-201ENSMUST00000203179 475 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Gm45209-201ENSMUST00000207122 353 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 AC132315.1-201ENSMUST00000221771 390 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 CT030184.1-201ENSMUST00000222393 416 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 AC124562.1-201ENSMUST00000224673 337 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 AC172751.1-201ENSMUST00000226887 440 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 AC127371.1-202ENSMUST00000228923 306 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Olfr728-201ENSMUST00000051563 936 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Gm10038-201ENSMUST00000077233 441 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Gm10042-201ENSMUST00000079884 78 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Gm25147-201ENSMUST00000083030 105 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 n-R5s85-201ENSMUST00000083453 113 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Gm23847-201ENSMUST00000083829 110 ntBASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Trav3-3Q5R1C3 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm2066-201ENSMUST00000118046 389 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm14469-201ENSMUST00000118363 202 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm2318-201ENSMUST00000119623 639 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm14913-201ENSMUST00000120011 1093 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm2005-201ENSMUST00000120759 542 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm23755-201ENSMUST00000157578 343 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm17065-201ENSMUST00000165245 239 ntBASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.35□□□□□ -2.03
Trav3-3Q5R1C3 Gm26219-201ENSMUST00000175216 71 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms