Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm14599-201ENSMUST00000120469 474 ntBASIC2.39□□□□□ -2.03
Col5a1O88207 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Col5a1O88207 Gm24532-201ENSMUST00000157951 286 ntBASIC2.39□□□□□ -2.03
Col5a1O88207 Gm26000-201ENSMUST00000157991 107 ntBASIC2.39□□□□□ -2.03
Col5a1O88207 Gm24854-201ENSMUST00000158025 98 ntBASIC2.39□□□□□ -2.03
Col5a1O88207 Gm22947-201ENSMUST00000158559 91 ntBASIC2.39□□□□□ -2.03
Col5a1O88207 Gm5263-201ENSMUST00000163646 601 ntBASIC2.39□□□□□ -2.03
Col5a1O88207 Gm17030-201ENSMUST00000167016 393 ntBASIC2.39□□□□□ -2.03
Col5a1O88207 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.39□□□□□ -2.03
Col5a1O88207 Snord53-201ENSMUST00000175146 78 ntBASIC2.39□□□□□ -2.03
Col5a1O88207 Gm27786-201ENSMUST00000184337 70 ntBASIC2.39□□□□□ -2.03
Col5a1O88207 Gm38283-201ENSMUST00000193041 695 ntBASIC2.39□□□□□ -2.03
Col5a1O88207 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.39□□□□□ -2.03
Col5a1O88207 Gm44615-201ENSMUST00000206548 358 ntBASIC2.39□□□□□ -2.03
Col5a1O88207 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
Col5a1O88207 Gm7753-201ENSMUST00000221007 867 ntBASIC2.39□□□□□ -2.03
Col5a1O88207 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.39□□□□□ -2.03
Col5a1O88207 Olfr204-201ENSMUST00000072517 918 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
Col5a1O88207 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.39□□□□□ -2.03
Col5a1O88207 Gm10780-201ENSMUST00000099459 285 ntBASIC2.39□□□□□ -2.03
Col5a1O88207 Gm7957-201ENSMUST00000207404 2602 ntBASIC2.39□□□□□ -2.03
Col5a1O88207 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
Col5a1O88207 Gm43886-201ENSMUST00000205039 2386 ntBASIC2.39□□□□□ -2.03
Col5a1O88207 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.38□□□□□ -2.03
Col5a1O88207 Olfr101-203ENSMUST00000215392 2899 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Col5a1O88207 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Col5a1O88207 Gm27898-201ENSMUST00000183987 80 ntBASIC2.38□□□□□ -2.03
Col5a1O88207 Gm29492-201ENSMUST00000187124 457 ntBASIC2.38□□□□□ -2.03
Col5a1O88207 Gm38008-201ENSMUST00000195333 518 ntBASIC2.38□□□□□ -2.03
Col5a1O88207 Gm45678-201ENSMUST00000210509 295 ntBASIC2.38□□□□□ -2.03
Col5a1O88207 Gm45382-201ENSMUST00000210607 151 ntBASIC2.38□□□□□ -2.03
Col5a1O88207 Gm18039-201ENSMUST00000217816 728 ntBASIC2.38□□□□□ -2.03
Col5a1O88207 Gm46996-201ENSMUST00000220924 408 ntBASIC2.38□□□□□ -2.03
Col5a1O88207 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Col5a1O88207 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
Col5a1O88207 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Col5a1O88207 Mir350-201ENSMUST00000083639 99 ntBASIC2.38□□□□□ -2.03
Col5a1O88207 Gm20541-201ENSMUST00000173035 1406 ntBASIC2.38□□□□□ -2.03
Col5a1O88207 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.38□□□□□ -2.03
Col5a1O88207 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.38□□□□□ -2.03
Col5a1O88207 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.38□□□□□ -2.03
Col5a1O88207 n-R5s52-201ENSMUST00000104614 113 ntBASIC2.38□□□□□ -2.03
Col5a1O88207 Gm14554-201ENSMUST00000119548 661 ntBASIC2.38□□□□□ -2.03
Col5a1O88207 Gm13059-201ENSMUST00000119881 398 ntBASIC2.38□□□□□ -2.03
Col5a1O88207 Gm5396-201ENSMUST00000121222 532 ntBASIC2.38□□□□□ -2.03
Col5a1O88207 Gm26277-201ENSMUST00000157097 152 ntBASIC2.38□□□□□ -2.03
Col5a1O88207 Gm24177-201ENSMUST00000158927 131 ntBASIC2.38□□□□□ -2.03
Col5a1O88207 Gm23548-201ENSMUST00000158963 106 ntBASIC2.38□□□□□ -2.03
Col5a1O88207 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC2.38□□□□□ -2.03
Col5a1O88207 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Col5a1O88207 Gm26622-201ENSMUST00000180520 298 ntBASIC2.38□□□□□ -2.03
Col5a1O88207 1700041C23Rik-201ENSMUST00000185243 395 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Col5a1O88207 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC2.38□□□□□ -2.03
Col5a1O88207 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC2.38□□□□□ -2.03
Col5a1O88207 Gm28466-201ENSMUST00000190678 659 ntBASIC2.38□□□□□ -2.03
Col5a1O88207 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC2.38□□□□□ -2.03
Col5a1O88207 Gm44817-201ENSMUST00000205416 453 ntBASIC2.38□□□□□ -2.03
Col5a1O88207 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC2.38□□□□□ -2.03
Col5a1O88207 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Col5a1O88207 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC2.38□□□□□ -2.03
Col5a1O88207 AC158631.1-201ENSMUST00000219202 138 ntBASIC2.38□□□□□ -2.03
Col5a1O88207 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Col5a1O88207 Pbsn-201ENSMUST00000000003 902 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Col5a1O88207 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Col5a1O88207 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
Col5a1O88207 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
Col5a1O88207 Gm14786-201ENSMUST00000117127 944 ntBASIC2.37□□□□□ -2.03
Col5a1O88207 Gm13471-201ENSMUST00000122057 433 ntBASIC2.37□□□□□ -2.03
Col5a1O88207 Gm16359-201ENSMUST00000124511 289 ntBASIC2.37□□□□□ -2.03
Col5a1O88207 Gm16355-201ENSMUST00000128606 231 ntBASIC2.37□□□□□ -2.03
Col5a1O88207 Gm22923-201ENSMUST00000174952 110 ntBASIC2.37□□□□□ -2.03
Col5a1O88207 Mir3473c-201ENSMUST00000175262 81 ntBASIC2.37□□□□□ -2.03
Col5a1O88207 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.37□□□□□ -2.03
Col5a1O88207 Gm43427-201ENSMUST00000198188 331 ntBASIC2.37□□□□□ -2.03
Col5a1O88207 Gm29815-201ENSMUST00000202418 178 ntBASIC2.37□□□□□ -2.03
Col5a1O88207 Gm44332-201ENSMUST00000203712 433 ntBASIC2.37□□□□□ -2.03
Col5a1O88207 Gm45150-201ENSMUST00000206051 467 ntBASIC2.37□□□□□ -2.03
Col5a1O88207 AC132104.1-201ENSMUST00000213615 260 ntBASIC2.37□□□□□ -2.03
Col5a1O88207 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Col5a1O88207 Gm45483-201ENSMUST00000209845 1682 ntBASIC2.37□□□□□ -2.03
Col5a1O88207 Gm3956-201ENSMUST00000164882 2560 ntBASIC2.37□□□□□ -2.03
Col5a1O88207 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.37□□□□□ -2.03
Col5a1O88207 4930509J09Rik-201ENSMUST00000194514 1526 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Col5a1O88207 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Col5a1O88207 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Col5a1O88207 Gm14159-201ENSMUST00000119832 451 ntBASIC2.36□□□□□ -2.03
Col5a1O88207 Gm15019-201ENSMUST00000120148 434 ntBASIC2.36□□□□□ -2.03
Col5a1O88207 Gm12731-201ENSMUST00000120932 268 ntBASIC2.36□□□□□ -2.03
Col5a1O88207 Gm8580-201ENSMUST00000160295 464 ntBASIC2.36□□□□□ -2.03
Col5a1O88207 Gm8338-201ENSMUST00000163928 363 ntBASIC2.36□□□□□ -2.03
Col5a1O88207 Gm23289-201ENSMUST00000175615 108 ntBASIC2.36□□□□□ -2.03
Col5a1O88207 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Col5a1O88207 Gm27470-201ENSMUST00000184070 210 ntBASIC2.36□□□□□ -2.03
Col5a1O88207 Mir6997-201ENSMUST00000184313 71 ntBASIC2.36□□□□□ -2.03
Col5a1O88207 Gm44477-201ENSMUST00000199661 110 ntBASIC2.36□□□□□ -2.03
Col5a1O88207 Gm43922-201ENSMUST00000205071 328 ntBASIC2.36□□□□□ -2.03
Col5a1O88207 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC2.36□□□□□ -2.03
Col5a1O88207 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC2.36□□□□□ -2.03
Col5a1O88207 Gm46389-201ENSMUST00000223199 392 ntBASIC2.36□□□□□ -2.03
Col5a1O88207 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms