Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Col6a3E9PWQ3 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC2.31□□□□□ -2.04
Col6a3E9PWQ3 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Col6a3E9PWQ3 Gm8080-201ENSMUST00000122046 1155 ntBASIC2.3□□□□□ -2.04
Col6a3E9PWQ3 Gm25888-201ENSMUST00000157778 302 ntBASIC2.3□□□□□ -2.04
Col6a3E9PWQ3 Gm28534-201ENSMUST00000187744 676 ntBASIC2.3□□□□□ -2.04
Col6a3E9PWQ3 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC2.3□□□□□ -2.04
Col6a3E9PWQ3 Gm25581-201ENSMUST00000083410 164 ntBASIC2.3□□□□□ -2.04
Col6a3E9PWQ3 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Col6a3E9PWQ3 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Col6a3E9PWQ3 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
Col6a3E9PWQ3 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Col6a3E9PWQ3 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
Col6a3E9PWQ3 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Col6a3E9PWQ3 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
Col6a3E9PWQ3 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
Col6a3E9PWQ3 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
Col6a3E9PWQ3 Zfp644-203ENSMUST00000112695 1915 ntTSL 5 BASIC2.3□□□□□ -2.04
Col6a3E9PWQ3 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.3□□□□□ -2.04
Col6a3E9PWQ3 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.3□□□□□ -2.04
Col6a3E9PWQ3 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Col6a3E9PWQ3 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
Col6a3E9PWQ3 Gm14429-201ENSMUST00000121881 2024 ntBASIC2.3□□□□□ -2.04
Col6a3E9PWQ3 Huwe1-202ENSMUST00000112622 14168 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
Col6a3E9PWQ3 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
Col6a3E9PWQ3 Gm24677-201ENSMUST00000158755 150 ntBASIC2.3□□□□□ -2.04
Col6a3E9PWQ3 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Col6a3E9PWQ3 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.3□□□□□ -2.04
Col6a3E9PWQ3 Gm43239-201ENSMUST00000200131 201 ntBASIC2.3□□□□□ -2.04
Col6a3E9PWQ3 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Col6a3E9PWQ3 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Col6a3E9PWQ3 Gm24863-201ENSMUST00000179499 107 ntBASIC2.29□□□□□ -2.04
Col6a3E9PWQ3 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Col6a3E9PWQ3 Gm46993-201ENSMUST00000220708 259 ntBASIC2.29□□□□□ -2.04
Col6a3E9PWQ3 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC2.29□□□□□ -2.04
Col6a3E9PWQ3 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Col6a3E9PWQ3 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Col6a3E9PWQ3 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
Col6a3E9PWQ3 Gm4855-201ENSMUST00000192270 1967 ntBASIC2.29□□□□□ -2.04
Col6a3E9PWQ3 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC2.29□□□□□ -2.04
Col6a3E9PWQ3 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.29□□□□□ -2.04
Col6a3E9PWQ3 Gm15846-201ENSMUST00000116022 320 ntBASIC2.29□□□□□ -2.04
Col6a3E9PWQ3 Gm24630-201ENSMUST00000122768 106 ntBASIC2.29□□□□□ -2.04
Col6a3E9PWQ3 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC2.29□□□□□ -2.04
Col6a3E9PWQ3 AC159819.1-201ENSMUST00000213911 328 ntBASIC2.29□□□□□ -2.04
Col6a3E9PWQ3 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.29□□□□□ -2.04
Col6a3E9PWQ3 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Col6a3E9PWQ3 Snora23-201ENSMUST00000082517 184 ntBASIC2.29□□□□□ -2.04
Col6a3E9PWQ3 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC2.29□□□□□ -2.04
Col6a3E9PWQ3 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Col6a3E9PWQ3 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Col6a3E9PWQ3 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC2.29□□□□□ -2.04
Col6a3E9PWQ3 Gm38172-201ENSMUST00000195321 567 ntTSL 5 BASIC2.29□□□□□ -2.04
Col6a3E9PWQ3 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC2.29□□□□□ -2.04
Col6a3E9PWQ3 Gm7751-201ENSMUST00000212868 709 ntBASIC2.29□□□□□ -2.04
Col6a3E9PWQ3 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC2.29□□□□□ -2.04
Col6a3E9PWQ3 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Col6a3E9PWQ3 Olfr1133-201ENSMUST00000099855 942 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Col6a3E9PWQ3 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
Col6a3E9PWQ3 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Col6a3E9PWQ3 Gm6829-201ENSMUST00000119858 360 ntBASIC2.28□□□□□ -2.04
Col6a3E9PWQ3 Gm28399-201ENSMUST00000186221 318 ntBASIC2.28□□□□□ -2.04
Col6a3E9PWQ3 Gm28572-201ENSMUST00000187444 318 ntBASIC2.28□□□□□ -2.04
Col6a3E9PWQ3 Scgb2b32-ps-201ENSMUST00000190326 337 ntBASIC2.28□□□□□ -2.04
Col6a3E9PWQ3 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC2.28□□□□□ -2.04
Col6a3E9PWQ3 CT009713.9-201ENSMUST00000223604 389 ntBASIC2.28□□□□□ -2.04
Col6a3E9PWQ3 AC139845.2-201ENSMUST00000227504 436 ntBASIC2.28□□□□□ -2.04
Col6a3E9PWQ3 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Col6a3E9PWQ3 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.28□□□□□ -2.04
Col6a3E9PWQ3 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Col6a3E9PWQ3 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Col6a3E9PWQ3 Gm14119-201ENSMUST00000119511 235 ntBASIC2.27□□□□□ -2.05
Col6a3E9PWQ3 Mir1954-201ENSMUST00000175595 86 ntBASIC2.27□□□□□ -2.05
Col6a3E9PWQ3 Gm45814-201ENSMUST00000212646 775 ntBASIC2.27□□□□□ -2.05
Col6a3E9PWQ3 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Col6a3E9PWQ3 Pate4-201ENSMUST00000034610 1072 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Col6a3E9PWQ3 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Col6a3E9PWQ3 Gm28200-201ENSMUST00000187778 315 ntBASIC2.27□□□□□ -2.05
Col6a3E9PWQ3 Gm29378-201ENSMUST00000188723 315 ntBASIC2.27□□□□□ -2.05
Col6a3E9PWQ3 Gm28909-201ENSMUST00000189406 315 ntBASIC2.27□□□□□ -2.05
Col6a3E9PWQ3 AC115735.1-201ENSMUST00000226633 350 ntBASIC2.27□□□□□ -2.05
Col6a3E9PWQ3 AC124182.1-201ENSMUST00000227091 321 ntBASIC2.27□□□□□ -2.05
Col6a3E9PWQ3 Gm43718-201ENSMUST00000197524 1857 ntBASIC2.27□□□□□ -2.05
Col6a3E9PWQ3 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Col6a3E9PWQ3 Mir711-201ENSMUST00000102188 82 ntBASIC2.27□□□□□ -2.05
Col6a3E9PWQ3 Gm46312-201ENSMUST00000220961 420 ntBASIC2.27□□□□□ -2.05
Col6a3E9PWQ3 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Col6a3E9PWQ3 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Col6a3E9PWQ3 Olfr147-202ENSMUST00000214648 5356 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
Col6a3E9PWQ3 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Col6a3E9PWQ3 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Col6a3E9PWQ3 Gm45033-201ENSMUST00000206710 3167 ntBASIC2.26□□□□□ -2.05
Col6a3E9PWQ3 Gm13024-201ENSMUST00000121756 718 ntBASIC2.26□□□□□ -2.05
Col6a3E9PWQ3 Gm38334-201ENSMUST00000195060 313 ntBASIC2.26□□□□□ -2.05
Col6a3E9PWQ3 AC141642.1-201ENSMUST00000220598 229 ntBASIC2.26□□□□□ -2.05
Col6a3E9PWQ3 Gm23447-201ENSMUST00000082798 163 ntBASIC2.26□□□□□ -2.05
Col6a3E9PWQ3 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
Col6a3E9PWQ3 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Col6a3E9PWQ3 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Col6a3E9PWQ3 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms