Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Clp1Q99LI9 Foxr2-201ENSMUST00000096265 3210 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Clp1Q99LI9 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm45555-201ENSMUST00000210028 2602 ntBASIC5.24□□□□□ -1.57
Clp1Q99LI9 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
Clp1Q99LI9 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Clp1Q99LI9 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Clp1Q99LI9 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Clp1Q99LI9 AC167420.1-201ENSMUST00000222999 2121 ntBASIC5.23□□□□□ -1.57
Clp1Q99LI9 Dock10-205ENSMUST00000187774 6796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Clp1Q99LI9 Egfros-201ENSMUST00000150329 4063 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Clp1Q99LI9 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Clp1Q99LI9 Gm11251-201ENSMUST00000119593 2800 ntBASIC5.23□□□□□ -1.57
Clp1Q99LI9 Gm23941-201ENSMUST00000101953 107 ntBASIC5.23□□□□□ -1.57
Clp1Q99LI9 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Clp1Q99LI9 Mir466b-8-201ENSMUST00000103883 86 ntBASIC5.23□□□□□ -1.57
Clp1Q99LI9 Gm26147-201ENSMUST00000104479 114 ntBASIC5.23□□□□□ -1.57
Clp1Q99LI9 Gm22493-201ENSMUST00000104494 132 ntBASIC5.23□□□□□ -1.57
Clp1Q99LI9 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Clp1Q99LI9 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC5.23□□□□□ -1.57
Clp1Q99LI9 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC5.23□□□□□ -1.57
Clp1Q99LI9 Gm23318-201ENSMUST00000158000 108 ntBASIC5.23□□□□□ -1.57
Clp1Q99LI9 Gm23581-201ENSMUST00000158531 63 ntBASIC5.23□□□□□ -1.57
Clp1Q99LI9 Gm16318-201ENSMUST00000162402 601 ntBASIC5.23□□□□□ -1.57
Clp1Q99LI9 Gm9022-202ENSMUST00000183285 483 ntBASIC5.23□□□□□ -1.57
Clp1Q99LI9 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC5.23□□□□□ -1.57
Clp1Q99LI9 Gm29330-201ENSMUST00000190032 699 ntBASIC5.23□□□□□ -1.57
Clp1Q99LI9 Gm42621-201ENSMUST00000198114 275 ntBASIC5.23□□□□□ -1.57
Clp1Q99LI9 Gm44324-201ENSMUST00000198517 135 ntBASIC5.23□□□□□ -1.57
Clp1Q99LI9 Mir466e-201ENSMUST00000198862 84 ntBASIC5.23□□□□□ -1.57
Clp1Q99LI9 Gm44463-201ENSMUST00000198895 137 ntBASIC5.23□□□□□ -1.57
Clp1Q99LI9 Gm42453-201ENSMUST00000200477 409 ntBASIC5.23□□□□□ -1.57
Clp1Q99LI9 Mir466c-1-201ENSMUST00000200654 84 ntBASIC5.23□□□□□ -1.57
Clp1Q99LI9 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.23□□□□□ -1.57
Clp1Q99LI9 Gm22061-201ENSMUST00000082557 107 ntBASIC5.23□□□□□ -1.57
Clp1Q99LI9 Gm25801-201ENSMUST00000082638 106 ntBASIC5.23□□□□□ -1.57
Clp1Q99LI9 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
Clp1Q99LI9 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC5.23□□□□□ -1.57
Clp1Q99LI9 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Clp1Q99LI9 Olfr1341-202ENSMUST00000214131 4300 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Clp1Q99LI9 Entpd1-201ENSMUST00000112231 4221 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
Clp1Q99LI9 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.23□□□□□ -1.57
Clp1Q99LI9 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Clp1Q99LI9 D630030B08Rik-201ENSMUST00000202983 3479 ntBASIC5.22□□□□□ -1.57
Clp1Q99LI9 Cd180-201ENSMUST00000022124 2650 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Clp1Q99LI9 Gm43648-201ENSMUST00000197775 2485 ntBASIC5.22□□□□□ -1.57
Clp1Q99LI9 Gm37696-201ENSMUST00000194223 3349 ntBASIC5.22□□□□□ -1.57
Clp1Q99LI9 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
Clp1Q99LI9 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
Clp1Q99LI9 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Clp1Q99LI9 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Clp1Q99LI9 Mcf2-203ENSMUST00000101531 3671 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
Clp1Q99LI9 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Clp1Q99LI9 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Clp1Q99LI9 Gm23014-201ENSMUST00000104144 130 ntBASIC5.22□□□□□ -1.57
Clp1Q99LI9 Gm25726-201ENSMUST00000104529 129 ntBASIC5.22□□□□□ -1.57
Clp1Q99LI9 Gm14537-201ENSMUST00000117464 599 ntBASIC5.22□□□□□ -1.57
Clp1Q99LI9 Gm15844-201ENSMUST00000118016 576 ntBASIC5.22□□□□□ -1.57
Clp1Q99LI9 n-R5s21-201ENSMUST00000122692 117 ntBASIC5.22□□□□□ -1.57
Clp1Q99LI9 Gm25184-201ENSMUST00000157753 163 ntBASIC5.22□□□□□ -1.57
Clp1Q99LI9 Gm20534-201ENSMUST00000172957 172 ntBASIC5.22□□□□□ -1.57
Clp1Q99LI9 Mir6960-201ENSMUST00000183449 61 ntBASIC5.22□□□□□ -1.57
Clp1Q99LI9 Gm19427-201ENSMUST00000183619 208 ntBASIC5.22□□□□□ -1.57
Clp1Q99LI9 AC122464.1-201ENSMUST00000202789 770 ntBASIC5.22□□□□□ -1.57
Clp1Q99LI9 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC5.22□□□□□ -1.57
Clp1Q99LI9 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC5.22□□□□□ -1.57
Clp1Q99LI9 CT010454.1-201ENSMUST00000225975 265 ntBASIC5.22□□□□□ -1.57
Clp1Q99LI9 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Clp1Q99LI9 Gm24031-201ENSMUST00000083930 131 ntBASIC5.22□□□□□ -1.57
Clp1Q99LI9 Gm44821-201ENSMUST00000208212 2002 ntBASIC5.22□□□□□ -1.57
Clp1Q99LI9 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Clp1Q99LI9 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Clp1Q99LI9 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Clp1Q99LI9 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
Clp1Q99LI9 Gm37879-201ENSMUST00000193112 1995 ntBASIC5.22□□□□□ -1.57
Clp1Q99LI9 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
Clp1Q99LI9 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
Clp1Q99LI9 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
Clp1Q99LI9 Gm43320-201ENSMUST00000196047 2916 ntBASIC5.21□□□□□ -1.57
Clp1Q99LI9 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Clp1Q99LI9 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.21□□□□□ -1.58
Clp1Q99LI9 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
Clp1Q99LI9 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Clp1Q99LI9 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
Clp1Q99LI9 Gm24124-201ENSMUST00000104103 132 ntBASIC5.21□□□□□ -1.58
Clp1Q99LI9 Gm13250-201ENSMUST00000117209 753 ntBASIC5.21□□□□□ -1.58
Clp1Q99LI9 Gm11432-201ENSMUST00000117334 231 ntBASIC5.21□□□□□ -1.58
Clp1Q99LI9 Gm11971-201ENSMUST00000117715 288 ntBASIC5.21□□□□□ -1.58
Clp1Q99LI9 Gm11936-201ENSMUST00000118323 160 ntBASIC5.21□□□□□ -1.58
Clp1Q99LI9 Gm14688-201ENSMUST00000119169 303 ntBASIC5.21□□□□□ -1.58
Clp1Q99LI9 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC5.21□□□□□ -1.58
Clp1Q99LI9 Gm26149-201ENSMUST00000157432 108 ntBASIC5.21□□□□□ -1.58
Clp1Q99LI9 Gm24690-201ENSMUST00000157759 97 ntBASIC5.21□□□□□ -1.58
Clp1Q99LI9 Gm21816-201ENSMUST00000179255 360 ntBASIC5.21□□□□□ -1.58
Clp1Q99LI9 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Clp1Q99LI9 Gm27477-201ENSMUST00000184649 143 ntBASIC5.21□□□□□ -1.58
Clp1Q99LI9 Gm27624-201ENSMUST00000185047 177 ntBASIC5.21□□□□□ -1.58
Clp1Q99LI9 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Clp1Q99LI9 Gm7837-201ENSMUST00000190873 412 ntBASIC5.21□□□□□ -1.58
Clp1Q99LI9 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms