Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm15737-201ENSMUST00000113434 4894 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim47Q8C0E3 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.61□□□□□ -1.51
Trim47Q8C0E3 Gm23422-201ENSMUST00000102000 107 ntBASIC5.61□□□□□ -1.51
Trim47Q8C0E3 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Trim47Q8C0E3 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC5.61□□□□□ -1.51
Trim47Q8C0E3 Gm2066-201ENSMUST00000118046 389 ntBASIC5.61□□□□□ -1.51
Trim47Q8C0E3 Gm14846-201ENSMUST00000121868 216 ntBASIC5.61□□□□□ -1.51
Trim47Q8C0E3 Gm24629-201ENSMUST00000122762 89 ntBASIC5.61□□□□□ -1.51
Trim47Q8C0E3 Gm23534-201ENSMUST00000157539 97 ntBASIC5.61□□□□□ -1.51
Trim47Q8C0E3 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim47Q8C0E3 Gm27820-201ENSMUST00000183628 175 ntBASIC5.61□□□□□ -1.51
Trim47Q8C0E3 Mir6926-201ENSMUST00000184562 68 ntBASIC5.61□□□□□ -1.51
Trim47Q8C0E3 Gm29657-201ENSMUST00000189807 342 ntBASIC5.61□□□□□ -1.51
Trim47Q8C0E3 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC5.61□□□□□ -1.51
Trim47Q8C0E3 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC5.61□□□□□ -1.51
Trim47Q8C0E3 Olfr716-206ENSMUST00000215284 3515 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Trim47Q8C0E3 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.61□□□□□ -1.51
Trim47Q8C0E3 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.61□□□□□ -1.51
Trim47Q8C0E3 Gm5215-201ENSMUST00000054380 405 ntBASIC5.61□□□□□ -1.51
Trim47Q8C0E3 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim47Q8C0E3 Gm10813-201ENSMUST00000099936 90 ntBASIC5.61□□□□□ -1.51
Trim47Q8C0E3 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC5.61□□□□□ -1.51
Trim47Q8C0E3 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim47Q8C0E3 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.61□□□□□ -1.51
Trim47Q8C0E3 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Trim47Q8C0E3 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim47Q8C0E3 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Trim47Q8C0E3 Gm44789-201ENSMUST00000207195 3101 ntBASIC5.6□□□□□ -1.51
Trim47Q8C0E3 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.6□□□□□ -1.51
Trim47Q8C0E3 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC5.6□□□□□ -1.51
Trim47Q8C0E3 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Trim47Q8C0E3 Gm14537-201ENSMUST00000117464 599 ntBASIC5.6□□□□□ -1.51
Trim47Q8C0E3 Gm12423-201ENSMUST00000118334 135 ntBASIC5.6□□□□□ -1.51
Trim47Q8C0E3 Gm12118-201ENSMUST00000119766 532 ntBASIC5.6□□□□□ -1.51
Trim47Q8C0E3 Gm23463-201ENSMUST00000122468 99 ntBASIC5.6□□□□□ -1.51
Trim47Q8C0E3 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC5.6□□□□□ -1.51
Trim47Q8C0E3 Gm27926-201ENSMUST00000157180 66 ntBASIC5.6□□□□□ -1.51
Trim47Q8C0E3 Gm22277-201ENSMUST00000157204 277 ntBASIC5.6□□□□□ -1.51
Trim47Q8C0E3 Gm22084-201ENSMUST00000157585 105 ntBASIC5.6□□□□□ -1.51
Trim47Q8C0E3 Gm23513-201ENSMUST00000158181 133 ntBASIC5.6□□□□□ -1.51
Trim47Q8C0E3 Gm25907-201ENSMUST00000158486 125 ntBASIC5.6□□□□□ -1.51
Trim47Q8C0E3 Gm27551-201ENSMUST00000184258 77 ntBASIC5.6□□□□□ -1.51
Trim47Q8C0E3 Gm27492-201ENSMUST00000185194 187 ntBASIC5.6□□□□□ -1.51
Trim47Q8C0E3 Gm28097-201ENSMUST00000187333 366 ntBASIC5.6□□□□□ -1.51
Trim47Q8C0E3 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.6□□□□□ -1.51
Trim47Q8C0E3 Gm33962-202ENSMUST00000205195 630 ntTSL 5 BASIC5.6□□□□□ -1.51
Trim47Q8C0E3 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.6□□□□□ -1.51
Trim47Q8C0E3 Gm24705-201ENSMUST00000082808 107 ntBASIC5.6□□□□□ -1.51
Trim47Q8C0E3 Gm22297-201ENSMUST00000083312 106 ntBASIC5.6□□□□□ -1.51
Trim47Q8C0E3 Olfr49-202ENSMUST00000216214 5717 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trim47Q8C0E3 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
Trim47Q8C0E3 Gm14429-201ENSMUST00000121881 2024 ntBASIC5.6□□□□□ -1.51
Trim47Q8C0E3 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trim47Q8C0E3 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Trim47Q8C0E3 Svs2-201ENSMUST00000044953 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Gm6645-201ENSMUST00000118505 2726 ntBASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Ptprd-204ENSMUST00000102834 8084 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Gm43871-201ENSMUST00000204931 1955 ntBASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Gm23990-201ENSMUST00000117031 117 ntBASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Gm24630-201ENSMUST00000122768 106 ntBASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Gm20674-201ENSMUST00000177452 369 ntBASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Gm16378-201ENSMUST00000179168 342 ntBASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Gm26962-201ENSMUST00000182545 265 ntTSL 3 BASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Gm2497-201ENSMUST00000189539 601 ntBASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Gm28957-201ENSMUST00000190174 373 ntBASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Gm9238-201ENSMUST00000196181 329 ntBASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Gm43402-201ENSMUST00000197159 159 ntBASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Gm43427-201ENSMUST00000198188 331 ntBASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Gm18453-201ENSMUST00000208000 626 ntBASIC5.59□□□□□ -1.51
Trim47Q8C0E3 AC124739.2-201ENSMUST00000222201 109 ntBASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Gm5265-201ENSMUST00000076828 342 ntBASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Gm26456-201ENSMUST00000082831 111 ntBASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Dctn4-201ENSMUST00000025505 3738 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.59□□□□□ -1.51
Trim47Q8C0E3 Samd3-202ENSMUST00000164660 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Trim47Q8C0E3 Samd3-203ENSMUST00000218301 2620 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
Trim47Q8C0E3 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Trim47Q8C0E3 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Zfp65-201ENSMUST00000073157 3957 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Gm14421-201ENSMUST00000121755 1958 ntBASIC5.58□□□□□ -1.52
Trim47Q8C0E3 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms