Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Lcn4-201ENSMUST00000028283 774 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trim56Q80VI1 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
Trim56Q80VI1 Gm22740-201ENSMUST00000083439 109 ntBASIC5.26□□□□□ -1.57
Trim56Q80VI1 n-R5s7-201ENSMUST00000083755 121 ntBASIC5.26□□□□□ -1.57
Trim56Q80VI1 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.26□□□□□ -1.57
Trim56Q80VI1 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Trim56Q80VI1 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Trim56Q80VI1 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Trim56Q80VI1 Synpr-207ENSMUST00000223583 3362 ntBASIC5.25□□□□□ -1.57
Trim56Q80VI1 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC5.25□□□□□ -1.57
Trim56Q80VI1 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim56Q80VI1 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trim56Q80VI1 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC5.25□□□□□ -1.57
Trim56Q80VI1 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Trim56Q80VI1 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim56Q80VI1 Gm25565-201ENSMUST00000104605 105 ntBASIC5.25□□□□□ -1.57
Trim56Q80VI1 Gm14067-201ENSMUST00000119340 314 ntBASIC5.25□□□□□ -1.57
Trim56Q80VI1 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim56Q80VI1 Gm12495-201ENSMUST00000119750 447 ntBASIC5.25□□□□□ -1.57
Trim56Q80VI1 Gm15962-201ENSMUST00000124184 750 ntTSL 3 BASIC5.25□□□□□ -1.57
Trim56Q80VI1 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC5.25□□□□□ -1.57
Trim56Q80VI1 Gm22084-201ENSMUST00000157585 105 ntBASIC5.25□□□□□ -1.57
Trim56Q80VI1 Gm25718-201ENSMUST00000158632 118 ntBASIC5.25□□□□□ -1.57
Trim56Q80VI1 Gm23023-201ENSMUST00000158767 109 ntBASIC5.25□□□□□ -1.57
Trim56Q80VI1 Gm4222-201ENSMUST00000165784 470 ntBASIC5.25□□□□□ -1.57
Trim56Q80VI1 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Trim56Q80VI1 Gm8207-201ENSMUST00000171204 502 ntBASIC5.25□□□□□ -1.57
Trim56Q80VI1 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Trim56Q80VI1 Gm21991-201ENSMUST00000180006 508 ntBASIC5.25□□□□□ -1.57
Trim56Q80VI1 Gm27457-201ENSMUST00000184771 156 ntBASIC5.25□□□□□ -1.57
Trim56Q80VI1 Gm28717-201ENSMUST00000189950 315 ntBASIC5.25□□□□□ -1.57
Trim56Q80VI1 Gm8874-201ENSMUST00000196826 286 ntBASIC5.25□□□□□ -1.57
Trim56Q80VI1 Gm19202-201ENSMUST00000198096 808 ntBASIC5.25□□□□□ -1.57
Trim56Q80VI1 Gm3010-201ENSMUST00000198805 448 ntBASIC5.25□□□□□ -1.57
Trim56Q80VI1 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC5.25□□□□□ -1.57
Trim56Q80VI1 Gm45209-201ENSMUST00000207122 353 ntBASIC5.25□□□□□ -1.57
Trim56Q80VI1 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC5.25□□□□□ -1.57
Trim56Q80VI1 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC5.25□□□□□ -1.57
Trim56Q80VI1 AC164437.2-201ENSMUST00000228915 797 ntBASIC5.25□□□□□ -1.57
Trim56Q80VI1 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Trim56Q80VI1 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC5.25□□□□□ -1.57
Trim56Q80VI1 n-R5s162-201ENSMUST00000082581 119 ntBASIC5.25□□□□□ -1.57
Trim56Q80VI1 Mir27a-201ENSMUST00000083510 87 ntBASIC5.25□□□□□ -1.57
Trim56Q80VI1 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim56Q80VI1 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Trim56Q80VI1 Vmn1r20-202ENSMUST00000227909 3709 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Trim56Q80VI1 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Trim56Q80VI1 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim56Q80VI1 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trim56Q80VI1 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Trim56Q80VI1 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Trim56Q80VI1 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim56Q80VI1 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC5.24□□□□□ -1.57
Trim56Q80VI1 Gm25560-201ENSMUST00000104606 176 ntBASIC5.24□□□□□ -1.57
Trim56Q80VI1 Gm15058-201ENSMUST00000117689 458 ntBASIC5.24□□□□□ -1.57
Trim56Q80VI1 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC5.24□□□□□ -1.57
Trim56Q80VI1 Gm12137-201ENSMUST00000119565 346 ntBASIC5.24□□□□□ -1.57
Trim56Q80VI1 Gm11430-201ENSMUST00000121317 217 ntBASIC5.24□□□□□ -1.57
Trim56Q80VI1 Gm12924-201ENSMUST00000121747 318 ntBASIC5.24□□□□□ -1.57
Trim56Q80VI1 Gm11403-201ENSMUST00000122195 369 ntBASIC5.24□□□□□ -1.57
Trim56Q80VI1 Gm6956-201ENSMUST00000134724 546 ntBASIC5.24□□□□□ -1.57
Trim56Q80VI1 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trim56Q80VI1 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC5.24□□□□□ -1.57
Trim56Q80VI1 Gm24729-201ENSMUST00000158225 137 ntBASIC5.24□□□□□ -1.57
Trim56Q80VI1 Gm17571-201ENSMUST00000167906 90 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Trim56Q80VI1 Gm24949-201ENSMUST00000183609 215 ntBASIC5.24□□□□□ -1.57
Trim56Q80VI1 Mir7222-201ENSMUST00000183740 75 ntBASIC5.24□□□□□ -1.57
Trim56Q80VI1 Gm21673-201ENSMUST00000186640 436 ntBASIC5.24□□□□□ -1.57
Trim56Q80VI1 Gm28255-201ENSMUST00000187101 694 ntBASIC5.24□□□□□ -1.57
Trim56Q80VI1 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim56Q80VI1 Gm21135-201ENSMUST00000189023 436 ntBASIC5.24□□□□□ -1.57
Trim56Q80VI1 Gm42832-201ENSMUST00000196361 745 ntBASIC5.24□□□□□ -1.57
Trim56Q80VI1 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC5.24□□□□□ -1.57
Trim56Q80VI1 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC5.24□□□□□ -1.57
Trim56Q80VI1 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC5.24□□□□□ -1.57
Trim56Q80VI1 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Trim56Q80VI1 Gm18602-201ENSMUST00000209794 851 ntBASIC5.24□□□□□ -1.57
Trim56Q80VI1 Gm45367-201ENSMUST00000210171 347 ntBASIC5.24□□□□□ -1.57
Trim56Q80VI1 AC123064.2-201ENSMUST00000217758 193 ntBASIC5.24□□□□□ -1.57
Trim56Q80VI1 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC5.24□□□□□ -1.57
Trim56Q80VI1 AC138290.2-201ENSMUST00000218822 369 ntBASIC5.24□□□□□ -1.57
Trim56Q80VI1 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC5.24□□□□□ -1.57
Trim56Q80VI1 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Trim56Q80VI1 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Trim56Q80VI1 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Trim56Q80VI1 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim56Q80VI1 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Trim56Q80VI1 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim56Q80VI1 Skint4-201ENSMUST00000069769 3367 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
Trim56Q80VI1 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Trim56Q80VI1 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Trim56Q80VI1 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
Trim56Q80VI1 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Trim56Q80VI1 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
Trim56Q80VI1 Gm45517-201ENSMUST00000209973 2468 ntBASIC5.23□□□□□ -1.57
Trim56Q80VI1 AC152981.1-201ENSMUST00000218320 2480 ntBASIC5.23□□□□□ -1.57
Trim56Q80VI1 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
Trim56Q80VI1 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Trim56Q80VI1 AC123705.2-201ENSMUST00000221653 2009 ntBASIC5.23□□□□□ -1.57
Trim56Q80VI1 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms