Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm45039-201ENSMUST00000209181 3477 ntBASIC3□□□□□ -1.93
Col2a1P28481 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Col2a1P28481 AC154552.6-201ENSMUST00000221365 1342 ntBASIC2.99□□□□□ -1.93
Col2a1P28481 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
Col2a1P28481 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
Col2a1P28481 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Col2a1P28481 Gm24670-201ENSMUST00000104154 132 ntBASIC2.99□□□□□ -1.93
Col2a1P28481 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC2.99□□□□□ -1.93
Col2a1P28481 Gm15195-201ENSMUST00000118775 263 ntBASIC2.99□□□□□ -1.93
Col2a1P28481 Gm11943-201ENSMUST00000119473 327 ntBASIC2.99□□□□□ -1.93
Col2a1P28481 Gm12587-201ENSMUST00000120180 427 ntBASIC2.99□□□□□ -1.93
Col2a1P28481 Gm13676-201ENSMUST00000122185 591 ntBASIC2.99□□□□□ -1.93
Col2a1P28481 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC2.99□□□□□ -1.93
Col2a1P28481 Gm22339-201ENSMUST00000157718 62 ntBASIC2.99□□□□□ -1.93
Col2a1P28481 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC2.99□□□□□ -1.93
Col2a1P28481 Gm17194-201ENSMUST00000164610 348 ntBASIC2.99□□□□□ -1.93
Col2a1P28481 Gm24082-201ENSMUST00000175175 83 ntBASIC2.99□□□□□ -1.93
Col2a1P28481 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
Col2a1P28481 Gm29534-201ENSMUST00000187328 382 ntBASIC2.99□□□□□ -1.93
Col2a1P28481 Gm29525-201ENSMUST00000189844 699 ntBASIC2.99□□□□□ -1.93
Col2a1P28481 Gm29523-201ENSMUST00000191415 699 ntBASIC2.99□□□□□ -1.93
Col2a1P28481 Gm29288-201ENSMUST00000191582 901 ntBASIC2.99□□□□□ -1.93
Col2a1P28481 Gm37837-201ENSMUST00000191743 604 ntBASIC2.99□□□□□ -1.93
Col2a1P28481 Gm37002-201ENSMUST00000194560 373 ntBASIC2.99□□□□□ -1.93
Col2a1P28481 Gm43704-201ENSMUST00000196164 496 ntBASIC2.99□□□□□ -1.93
Col2a1P28481 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC2.99□□□□□ -1.93
Col2a1P28481 Gm25820-202ENSMUST00000197479 128 ntBASIC2.99□□□□□ -1.93
Col2a1P28481 Gm43476-201ENSMUST00000197873 405 ntBASIC2.99□□□□□ -1.93
Col2a1P28481 Gm44403-201ENSMUST00000198554 129 ntBASIC2.99□□□□□ -1.93
Col2a1P28481 Gm43415-201ENSMUST00000201934 750 ntBASIC2.99□□□□□ -1.93
Col2a1P28481 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC2.99□□□□□ -1.93
Col2a1P28481 AC126043.1-201ENSMUST00000221304 1141 ntBASIC2.99□□□□□ -1.93
Col2a1P28481 AC158392.1-201ENSMUST00000223720 1069 ntBASIC2.99□□□□□ -1.93
Col2a1P28481 AC117656.3-205ENSMUST00000224606 1205 ntBASIC2.99□□□□□ -1.93
Col2a1P28481 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Col2a1P28481 Gm24207-201ENSMUST00000082781 108 ntBASIC2.99□□□□□ -1.93
Col2a1P28481 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Col2a1P28481 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
Col2a1P28481 Gm21379-201ENSMUST00000179772 1955 ntBASIC2.99□□□□□ -1.93
Col2a1P28481 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
Col2a1P28481 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.99□□□□□ -1.93
Col2a1P28481 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Col2a1P28481 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Col2a1P28481 Gm26474-201ENSMUST00000116762 122 ntBASIC2.98□□□□□ -1.93
Col2a1P28481 Gm15090-201ENSMUST00000118787 1196 ntBASIC2.98□□□□□ -1.93
Col2a1P28481 Gm14930-201ENSMUST00000118864 652 ntBASIC2.98□□□□□ -1.93
Col2a1P28481 Gm14593-201ENSMUST00000119948 294 ntBASIC2.98□□□□□ -1.93
Col2a1P28481 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
Col2a1P28481 Gm15089-201ENSMUST00000122332 1196 ntBASIC2.98□□□□□ -1.93
Col2a1P28481 Gm14713-201ENSMUST00000122362 686 ntBASIC2.98□□□□□ -1.93
Col2a1P28481 Gm22818-201ENSMUST00000157446 104 ntBASIC2.98□□□□□ -1.93
Col2a1P28481 Gm25898-201ENSMUST00000158303 106 ntBASIC2.98□□□□□ -1.93
Col2a1P28481 Gm23777-201ENSMUST00000158994 259 ntBASIC2.98□□□□□ -1.93
Col2a1P28481 Gm28637-201ENSMUST00000179424 345 ntBASIC2.98□□□□□ -1.93
Col2a1P28481 Gm27155-201ENSMUST00000183716 898 ntBASIC2.98□□□□□ -1.93
Col2a1P28481 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC2.98□□□□□ -1.93
Col2a1P28481 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC2.98□□□□□ -1.93
Col2a1P28481 Gm19280-201ENSMUST00000190191 205 ntBASIC2.98□□□□□ -1.93
Col2a1P28481 Gm38141-201ENSMUST00000192540 317 ntTSL 5 BASIC2.98□□□□□ -1.93
Col2a1P28481 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC2.98□□□□□ -1.93
Col2a1P28481 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
Col2a1P28481 Gm2676-201ENSMUST00000207279 606 ntBASIC2.98□□□□□ -1.93
Col2a1P28481 Gm9373-201ENSMUST00000208724 599 ntBASIC2.98□□□□□ -1.93
Col2a1P28481 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC2.98□□□□□ -1.93
Col2a1P28481 AL929285.1-201ENSMUST00000215522 229 ntBASIC2.98□□□□□ -1.93
Col2a1P28481 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC2.98□□□□□ -1.93
Col2a1P28481 AC153646.1-201ENSMUST00000223229 1279 ntBASIC2.98□□□□□ -1.93
Col2a1P28481 AC147639.1-201ENSMUST00000224216 661 ntBASIC2.98□□□□□ -1.93
Col2a1P28481 Gm26072-201ENSMUST00000083135 107 ntBASIC2.98□□□□□ -1.93
Col2a1P28481 Gm7957-201ENSMUST00000207404 2602 ntBASIC2.98□□□□□ -1.93
Col2a1P28481 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC2.98□□□□□ -1.93
Col2a1P28481 Gm3956-201ENSMUST00000164882 2560 ntBASIC2.98□□□□□ -1.93
Col2a1P28481 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
Col2a1P28481 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC2.98□□□□□ -1.93
Col2a1P28481 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
Col2a1P28481 Gm25313-201ENSMUST00000101817 116 ntBASIC2.97□□□□□ -1.93
Col2a1P28481 Gm14627-201ENSMUST00000118931 567 ntBASIC2.97□□□□□ -1.93
Col2a1P28481 Gm14589-201ENSMUST00000121640 727 ntBASIC2.97□□□□□ -1.93
Col2a1P28481 Gm12591-201ENSMUST00000122407 1177 ntBASIC2.97□□□□□ -1.93
Col2a1P28481 Gm22817-201ENSMUST00000157448 356 ntBASIC2.97□□□□□ -1.93
Col2a1P28481 Gm24773-201ENSMUST00000158513 99 ntBASIC2.97□□□□□ -1.93
Col2a1P28481 Gm2343-201ENSMUST00000161177 1042 ntBASIC2.97□□□□□ -1.93
Col2a1P28481 Gm16147-201ENSMUST00000162143 373 ntBASIC2.97□□□□□ -1.93
Col2a1P28481 Gm25476-201ENSMUST00000175125 185 ntBASIC2.97□□□□□ -1.93
Col2a1P28481 Gm25470-201ENSMUST00000175576 111 ntBASIC2.97□□□□□ -1.93
Col2a1P28481 Gm23287-201ENSMUST00000179427 116 ntBASIC2.97□□□□□ -1.93
Col2a1P28481 Gm23143-201ENSMUST00000180137 116 ntBASIC2.97□□□□□ -1.93
Col2a1P28481 Gm29330-201ENSMUST00000190032 699 ntBASIC2.97□□□□□ -1.93
Col2a1P28481 Gm28098-201ENSMUST00000191361 699 ntBASIC2.97□□□□□ -1.93
Col2a1P28481 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.97□□□□□ -1.93
Col2a1P28481 Gm28724-202ENSMUST00000194218 295 ntBASIC2.97□□□□□ -1.93
Col2a1P28481 Gm18843-201ENSMUST00000194982 719 ntBASIC2.97□□□□□ -1.93
Col2a1P28481 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.97□□□□□ -1.93
Col2a1P28481 Gm17911-201ENSMUST00000210806 877 ntBASIC2.97□□□□□ -1.93
Col2a1P28481 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC2.97□□□□□ -1.93
Col2a1P28481 CT030030.1-201ENSMUST00000218809 152 ntBASIC2.97□□□□□ -1.93
Col2a1P28481 Gm19233-201ENSMUST00000219772 936 ntBASIC2.97□□□□□ -1.93
Col2a1P28481 AC150560.3-201ENSMUST00000227442 455 ntBASIC2.97□□□□□ -1.93
Col2a1P28481 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
Col2a1P28481 Gm24871-201ENSMUST00000083099 116 ntBASIC2.97□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms