Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC2.71□□□□□ -1.97
Col1a1P11087 Gm13406-201ENSMUST00000121991 256 ntBASIC2.71□□□□□ -1.97
Col1a1P11087 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.71□□□□□ -1.97
Col1a1P11087 Mir669n-201ENSMUST00000158636 54 ntBASIC2.71□□□□□ -1.97
Col1a1P11087 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.97
Col1a1P11087 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
Col1a1P11087 Mir7225-201ENSMUST00000184178 54 ntBASIC2.71□□□□□ -1.97
Col1a1P11087 Mir142-201ENSMUST00000198092 64 ntBASIC2.71□□□□□ -1.97
Col1a1P11087 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC2.71□□□□□ -1.97
Col1a1P11087 Gm45382-201ENSMUST00000210607 151 ntBASIC2.71□□□□□ -1.97
Col1a1P11087 Gm19269-201ENSMUST00000211401 804 ntBASIC2.71□□□□□ -1.97
Col1a1P11087 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC2.71□□□□□ -1.97
Col1a1P11087 Gm18493-201ENSMUST00000192084 1612 ntBASIC2.71□□□□□ -1.98
Col1a1P11087 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.71□□□□□ -1.98
Col1a1P11087 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.71□□□□□ -1.98
Col1a1P11087 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Col1a1P11087 Gm36962-201ENSMUST00000192114 1761 ntBASIC2.71□□□□□ -1.98
Col1a1P11087 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.71□□□□□ -1.98
Col1a1P11087 Gm23885-201ENSMUST00000122682 294 ntBASIC2.71□□□□□ -1.98
Col1a1P11087 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Col1a1P11087 Gm22923-201ENSMUST00000174952 110 ntBASIC2.71□□□□□ -1.98
Col1a1P11087 Gm27527-201ENSMUST00000183903 99 ntBASIC2.71□□□□□ -1.98
Col1a1P11087 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC2.71□□□□□ -1.98
Col1a1P11087 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC2.71□□□□□ -1.98
Col1a1P11087 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.71□□□□□ -1.98
Col1a1P11087 Gm44694-201ENSMUST00000205317 1298 ntBASIC2.71□□□□□ -1.98
Col1a1P11087 Gm19761-201ENSMUST00000205372 391 ntBASIC2.71□□□□□ -1.98
Col1a1P11087 Gm44817-201ENSMUST00000205416 453 ntBASIC2.71□□□□□ -1.98
Col1a1P11087 AC131100.2-201ENSMUST00000227701 998 ntBASIC2.71□□□□□ -1.98
Col1a1P11087 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Col1a1P11087 Gm24207-201ENSMUST00000082781 108 ntBASIC2.71□□□□□ -1.98
Col1a1P11087 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.7□□□□□ -1.98
Col1a1P11087 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
Col1a1P11087 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
Col1a1P11087 Gm18300-201ENSMUST00000192792 1406 ntBASIC2.7□□□□□ -1.98
Col1a1P11087 Gm23063-201ENSMUST00000102350 93 ntBASIC2.7□□□□□ -1.98
Col1a1P11087 Gm6373-201ENSMUST00000121026 360 ntBASIC2.7□□□□□ -1.98
Col1a1P11087 Gm15275-201ENSMUST00000154752 347 ntBASIC2.7□□□□□ -1.98
Col1a1P11087 Gm23585-201ENSMUST00000157656 102 ntBASIC2.7□□□□□ -1.98
Col1a1P11087 Gm24010-201ENSMUST00000157731 282 ntBASIC2.7□□□□□ -1.98
Col1a1P11087 Gm22947-201ENSMUST00000158559 91 ntBASIC2.7□□□□□ -1.98
Col1a1P11087 Gm27991-201ENSMUST00000184804 137 ntBASIC2.7□□□□□ -1.98
Col1a1P11087 Gm37866-201ENSMUST00000191950 696 ntBASIC2.7□□□□□ -1.98
Col1a1P11087 Gm21006-201ENSMUST00000196930 667 ntBASIC2.7□□□□□ -1.98
Col1a1P11087 Gm45772-201ENSMUST00000212961 240 ntBASIC2.7□□□□□ -1.98
Col1a1P11087 Gm45789-201ENSMUST00000213038 364 ntBASIC2.7□□□□□ -1.98
Col1a1P11087 Gm18557-201ENSMUST00000218710 433 ntBASIC2.7□□□□□ -1.98
Col1a1P11087 Zmym2-202ENSMUST00000223669 1281 ntBASIC2.7□□□□□ -1.98
Col1a1P11087 CT572983.1-201ENSMUST00000226895 514 ntBASIC2.7□□□□□ -1.98
Col1a1P11087 Mir222-201ENSMUST00000083537 79 ntBASIC2.7□□□□□ -1.98
Col1a1P11087 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Col1a1P11087 Gm42537-201ENSMUST00000198260 2574 ntBASIC2.7□□□□□ -1.98
Col1a1P11087 Gm38265-201ENSMUST00000193479 3766 ntBASIC2.69□□□□□ -1.98
Col1a1P11087 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Col1a1P11087 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC2.69□□□□□ -1.98
Col1a1P11087 Gm24858-201ENSMUST00000158058 323 ntBASIC2.69□□□□□ -1.98
Col1a1P11087 Gm5263-201ENSMUST00000163646 601 ntBASIC2.69□□□□□ -1.98
Col1a1P11087 Gm44903-201ENSMUST00000206840 130 ntBASIC2.69□□□□□ -1.98
Col1a1P11087 Gm5175-202ENSMUST00000219699 529 ntBASIC2.69□□□□□ -1.98
Col1a1P11087 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC2.69□□□□□ -1.98
Col1a1P11087 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC2.69□□□□□ -1.98
Col1a1P11087 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Col1a1P11087 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Col1a1P11087 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Col1a1P11087 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Col1a1P11087 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.68□□□□□ -1.98
Col1a1P11087 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Col1a1P11087 Vmn1r89-203ENSMUST00000227176 4189 ntAPPRIS P2 BASIC2.68□□□□□ -1.98
Col1a1P11087 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.68□□□□□ -1.98
Col1a1P11087 Gm25938-201ENSMUST00000104139 166 ntBASIC2.68□□□□□ -1.98
Col1a1P11087 Gm12213-201ENSMUST00000119924 353 ntBASIC2.68□□□□□ -1.98
Col1a1P11087 Gm22793-201ENSMUST00000157227 330 ntBASIC2.68□□□□□ -1.98
Col1a1P11087 Gm24885-201ENSMUST00000158783 270 ntBASIC2.68□□□□□ -1.98
Col1a1P11087 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.68□□□□□ -1.98
Col1a1P11087 Gm16561-201ENSMUST00000163001 192 ntBASIC2.68□□□□□ -1.98
Col1a1P11087 Gm43427-201ENSMUST00000198188 331 ntBASIC2.68□□□□□ -1.98
Col1a1P11087 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC2.68□□□□□ -1.98
Col1a1P11087 AC154329.2-201ENSMUST00000225257 383 ntBASIC2.68□□□□□ -1.98
Col1a1P11087 AC183092.2-201ENSMUST00000225542 1153 ntBASIC2.68□□□□□ -1.98
Col1a1P11087 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Col1a1P11087 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC2.68□□□□□ -1.98
Col1a1P11087 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC2.68□□□□□ -1.98
Col1a1P11087 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Col1a1P11087 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Col1a1P11087 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
Col1a1P11087 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Col1a1P11087 Gm23010-201ENSMUST00000104151 126 ntBASIC2.67□□□□□ -1.98
Col1a1P11087 Mier1-203ENSMUST00000106855 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
Col1a1P11087 Gm25807-201ENSMUST00000122783 305 ntBASIC2.67□□□□□ -1.98
Col1a1P11087 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC2.67□□□□□ -1.98
Col1a1P11087 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Col1a1P11087 Gm27898-201ENSMUST00000183987 80 ntBASIC2.67□□□□□ -1.98
Col1a1P11087 Gm43440-201ENSMUST00000201957 729 ntBASIC2.67□□□□□ -1.98
Col1a1P11087 Olfr790-204ENSMUST00000218901 1070 ntBASIC2.67□□□□□ -1.98
Col1a1P11087 AC129308.2-201ENSMUST00000224588 789 ntBASIC2.67□□□□□ -1.98
Col1a1P11087 Olfr790-201ENSMUST00000056002 1070 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Col1a1P11087 Gm6030-201ENSMUST00000078768 402 ntBASIC2.67□□□□□ -1.98
Col1a1P11087 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC2.67□□□□□ -1.98
Col1a1P11087 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Col1a1P11087 Olfr1242-203ENSMUST00000143935 2406 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 85.3 ms