Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Gm44718-201ENSMUST00000206886 359 ntBASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Gm44688-201ENSMUST00000209083 537 ntBASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Gm7751-201ENSMUST00000212868 709 ntBASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 AL590503.1-201ENSMUST00000222053 321 ntBASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 AC144819.1-201ENSMUST00000227015 620 ntBASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Olfr1472-201ENSMUST00000077501 945 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Olfr1475-201ENSMUST00000080801 945 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Gm25739-201ENSMUST00000082886 107 ntBASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Trav6-6A0A075B603 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC2□□□□□ -2.09
Trav6-6A0A075B603 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2□□□□□ -2.09
Trav6-6A0A075B603 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav6-6A0A075B603 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2□□□□□ -2.09
Trav6-6A0A075B603 Gm24142-201ENSMUST00000101960 107 ntBASIC2□□□□□ -2.09
Trav6-6A0A075B603 Mir542-201ENSMUST00000102186 85 ntBASIC2□□□□□ -2.09
Trav6-6A0A075B603 Pigp-201ENSMUST00000113905 758 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav6-6A0A075B603 Gm13504-201ENSMUST00000117490 316 ntBASIC2□□□□□ -2.09
Trav6-6A0A075B603 Gm13803-201ENSMUST00000117547 489 ntBASIC2□□□□□ -2.09
Trav6-6A0A075B603 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC2□□□□□ -2.09
Trav6-6A0A075B603 Gm14795-201ENSMUST00000118461 471 ntBASIC2□□□□□ -2.09
Trav6-6A0A075B603 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC2□□□□□ -2.09
Trav6-6A0A075B603 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trav6-6A0A075B603 Gm12137-201ENSMUST00000119565 346 ntBASIC2□□□□□ -2.09
Trav6-6A0A075B603 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2□□□□□ -2.09
Trav6-6A0A075B603 Gm13913-201ENSMUST00000121126 260 ntBASIC2□□□□□ -2.09
Trav6-6A0A075B603 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2□□□□□ -2.09
Trav6-6A0A075B603 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav6-6A0A075B603 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC2□□□□□ -2.09
Trav6-6A0A075B603 Gm22651-201ENSMUST00000157872 94 ntBASIC2□□□□□ -2.09
Trav6-6A0A075B603 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2□□□□□ -2.09
Trav6-6A0A075B603 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2□□□□□ -2.09
Trav6-6A0A075B603 1700025F22Rik-203ENSMUST00000181284 562 ntTSL 3 BASIC2□□□□□ -2.09
Trav6-6A0A075B603 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2□□□□□ -2.09
Trav6-6A0A075B603 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2□□□□□ -2.09
Trav6-6A0A075B603 Gm29534-201ENSMUST00000187328 382 ntBASIC2□□□□□ -2.09
Trav6-6A0A075B603 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC2□□□□□ -2.09
Trav6-6A0A075B603 Gm37288-201ENSMUST00000193963 334 ntBASIC2□□□□□ -2.09
Trav6-6A0A075B603 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2□□□□□ -2.09
Trav6-6A0A075B603 Gm45445-201ENSMUST00000209586 232 ntBASIC2□□□□□ -2.09
Trav6-6A0A075B603 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2□□□□□ -2.09
Trav6-6A0A075B603 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC2□□□□□ -2.09
Trav6-6A0A075B603 AC167721.1-201ENSMUST00000217088 279 ntBASIC2□□□□□ -2.09
Trav6-6A0A075B603 Gm18892-201ENSMUST00000217628 881 ntBASIC2□□□□□ -2.09
Trav6-6A0A075B603 Gm46194-201ENSMUST00000218136 320 ntBASIC2□□□□□ -2.09
Trav6-6A0A075B603 AC154224.1-201ENSMUST00000224367 403 ntBASIC2□□□□□ -2.09
Trav6-6A0A075B603 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav6-6A0A075B603 Olfr854-201ENSMUST00000072419 948 ntAPPRIS P2 BASIC2□□□□□ -2.09
Trav6-6A0A075B603 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav6-6A0A075B603 Tpbpb-201ENSMUST00000080766 850 ntAPPRIS P2 TSL 1 (best) BASIC2□□□□□ -2.09
Trav6-6A0A075B603 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
Trav6-6A0A075B603 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC2□□□□□ -2.09
Trav6-6A0A075B603 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2□□□□□ -2.09
Trav6-6A0A075B603 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trav6-6A0A075B603 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2□□□□□ -2.09
Trav6-6A0A075B603 Olfr640-202ENSMUST00000218535 4009 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Trav6-6A0A075B603 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 Gm14627-201ENSMUST00000118931 567 ntBASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 Gm15272-201ENSMUST00000120865 233 ntBASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 Gm13901-201ENSMUST00000137252 468 ntBASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 Gm23980-201ENSMUST00000157135 158 ntBASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 Gm8902-201ENSMUST00000174341 1096 ntBASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 Snord93-201ENSMUST00000175580 71 ntBASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 Gm20718-201ENSMUST00000176058 259 ntBASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 Gm27786-201ENSMUST00000184337 70 ntBASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 Crs-ps-201ENSMUST00000203723 760 ntBASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 Gm45742-201ENSMUST00000212400 433 ntBASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 Gm18346-201ENSMUST00000216782 325 ntBASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 AC159380.1-201ENSMUST00000218096 121 ntBASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 AC123618.1-201ENSMUST00000220174 360 ntBASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 AC154594.1-201ENSMUST00000225171 1273 ntBASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 AC163664.1-201ENSMUST00000226251 1248 ntBASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 AC144628.1-201ENSMUST00000227943 466 ntBASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 Snord104-201ENSMUST00000083192 70 ntBASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 Mir423-201ENSMUST00000083584 109 ntBASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC1.99□□□□□ -2.09
Trav6-6A0A075B603 AC154552.6-201ENSMUST00000221365 1342 ntBASIC1.98□□□□□ -2.09
Trav6-6A0A075B603 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
Trav6-6A0A075B603 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
Trav6-6A0A075B603 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Trav6-6A0A075B603 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Trav6-6A0A075B603 Gm6429-201ENSMUST00000117144 475 ntBASIC1.98□□□□□ -2.09
Trav6-6A0A075B603 Gm11367-201ENSMUST00000117802 120 ntBASIC1.98□□□□□ -2.09
Trav6-6A0A075B603 Gm6591-201ENSMUST00000121063 434 ntBASIC1.98□□□□□ -2.09
Trav6-6A0A075B603 Gm14589-201ENSMUST00000121640 727 ntBASIC1.98□□□□□ -2.09
Trav6-6A0A075B603 Gm13131-201ENSMUST00000122228 321 ntBASIC1.98□□□□□ -2.09
Trav6-6A0A075B603 Defa-ps12-201ENSMUST00000122353 193 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 117.8 ms