Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm29092-201ENSMUST00000190768 315 ntBASIC5.26□□□□□ -1.57
Clp1Q99LI9 Gm29469-201ENSMUST00000191448 315 ntBASIC5.26□□□□□ -1.57
Clp1Q99LI9 Gm37338-201ENSMUST00000191986 127 ntBASIC5.26□□□□□ -1.57
Clp1Q99LI9 Gm17951-201ENSMUST00000198536 496 ntBASIC5.26□□□□□ -1.57
Clp1Q99LI9 AC124772.1-201ENSMUST00000221325 151 ntBASIC5.26□□□□□ -1.57
Clp1Q99LI9 AC101945.3-201ENSMUST00000226568 153 ntBASIC5.26□□□□□ -1.57
Clp1Q99LI9 Mecom-201ENSMUST00000061088 348 ntBASIC5.26□□□□□ -1.57
Clp1Q99LI9 Gm25207-201ENSMUST00000093745 107 ntBASIC5.26□□□□□ -1.57
Clp1Q99LI9 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
Clp1Q99LI9 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Clp1Q99LI9 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.26□□□□□ -1.57
Clp1Q99LI9 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
Clp1Q99LI9 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
Clp1Q99LI9 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC5.26□□□□□ -1.57
Clp1Q99LI9 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
Clp1Q99LI9 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Clp1Q99LI9 AC135119.1-201ENSMUST00000227935 3717 ntBASIC5.25□□□□□ -1.57
Clp1Q99LI9 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Clp1Q99LI9 Zfp229-203ENSMUST00000182603 4315 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Clp1Q99LI9 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC5.25□□□□□ -1.57
Clp1Q99LI9 Gm14628-201ENSMUST00000117508 635 ntBASIC5.25□□□□□ -1.57
Clp1Q99LI9 Gm11785-201ENSMUST00000120165 601 ntBASIC5.25□□□□□ -1.57
Clp1Q99LI9 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC5.25□□□□□ -1.57
Clp1Q99LI9 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Clp1Q99LI9 Gm25606-201ENSMUST00000158363 95 ntBASIC5.25□□□□□ -1.57
Clp1Q99LI9 Gm25907-201ENSMUST00000158486 125 ntBASIC5.25□□□□□ -1.57
Clp1Q99LI9 Gm16232-201ENSMUST00000162856 167 ntBASIC5.25□□□□□ -1.57
Clp1Q99LI9 A630095N17Rik-202ENSMUST00000180101 571 ntAPPRIS P4 TSL 3 BASIC5.25□□□□□ -1.57
Clp1Q99LI9 Gm26828-201ENSMUST00000180640 172 ntBASIC5.25□□□□□ -1.57
Clp1Q99LI9 Mir7222-201ENSMUST00000183740 75 ntBASIC5.25□□□□□ -1.57
Clp1Q99LI9 Gm27608-201ENSMUST00000184822 162 ntBASIC5.25□□□□□ -1.57
Clp1Q99LI9 Gm28257-201ENSMUST00000185244 463 ntBASIC5.25□□□□□ -1.57
Clp1Q99LI9 Gm18956-201ENSMUST00000192857 480 ntBASIC5.25□□□□□ -1.57
Clp1Q99LI9 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC5.25□□□□□ -1.57
Clp1Q99LI9 Gm36259-201ENSMUST00000197340 392 ntBASIC5.25□□□□□ -1.57
Clp1Q99LI9 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC5.25□□□□□ -1.57
Clp1Q99LI9 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC5.25□□□□□ -1.57
Clp1Q99LI9 AC153917.1-201ENSMUST00000218959 856 ntTSL 5 BASIC5.25□□□□□ -1.57
Clp1Q99LI9 Gm46190-201ENSMUST00000219650 427 ntBASIC5.25□□□□□ -1.57
Clp1Q99LI9 AC163357.1-201ENSMUST00000220847 233 ntBASIC5.25□□□□□ -1.57
Clp1Q99LI9 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC5.25□□□□□ -1.57
Clp1Q99LI9 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Clp1Q99LI9 Gm3584-201ENSMUST00000173822 2565 ntBASIC5.25□□□□□ -1.57
Clp1Q99LI9 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.25□□□□□ -1.57
Clp1Q99LI9 Olfr984-202ENSMUST00000213858 5186 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Clp1Q99LI9 Taok1-201ENSMUST00000017435 11813 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Clp1Q99LI9 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Clp1Q99LI9 AC115047.2-201ENSMUST00000214421 1848 ntBASIC5.25□□□□□ -1.57
Clp1Q99LI9 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.25□□□□□ -1.57
Clp1Q99LI9 Capn6-201ENSMUST00000087316 3561 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Clp1Q99LI9 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Clp1Q99LI9 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Clp1Q99LI9 Gm37868-201ENSMUST00000195578 2735 ntBASIC5.25□□□□□ -1.57
Clp1Q99LI9 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.24□□□□□ -1.57
Clp1Q99LI9 Ugt2b5-201ENSMUST00000067790 1858 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Clp1Q99LI9 Olfr402-202ENSMUST00000216722 3566 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm38010-201ENSMUST00000192592 2784 ntBASIC5.24□□□□□ -1.57
Clp1Q99LI9 Lpar4-201ENSMUST00000060576 4238 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Clp1Q99LI9 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Clp1Q99LI9 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Clp1Q99LI9 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC5.24□□□□□ -1.57
Clp1Q99LI9 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm14878-201ENSMUST00000118167 293 ntBASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm5123-201ENSMUST00000121905 837 ntBASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm5755-201ENSMUST00000152394 837 ntBASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm6058-201ENSMUST00000154261 399 ntBASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm25637-201ENSMUST00000157529 107 ntBASIC5.24□□□□□ -1.57
Clp1Q99LI9 4930570N18Rik-201ENSMUST00000159273 332 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm17072-201ENSMUST00000166673 658 ntBASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm26400-201ENSMUST00000175012 85 ntBASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm21860-201ENSMUST00000177893 309 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm21748-201ENSMUST00000179623 309 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Clp1Q99LI9 Mir7022-201ENSMUST00000183749 61 ntBASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm29320-201ENSMUST00000185235 615 ntBASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm29179-202ENSMUST00000186138 615 ntBASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm29448-201ENSMUST00000186675 615 ntBASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm29314-201ENSMUST00000186800 615 ntBASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm28253-202ENSMUST00000187971 615 ntBASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm29169-201ENSMUST00000189835 615 ntBASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm37123-201ENSMUST00000192994 1171 ntBASIC5.24□□□□□ -1.57
Clp1Q99LI9 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm45395-201ENSMUST00000209891 559 ntBASIC5.24□□□□□ -1.57
Clp1Q99LI9 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC5.24□□□□□ -1.57
Clp1Q99LI9 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
Clp1Q99LI9 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm2710-201ENSMUST00000073196 603 ntBASIC5.24□□□□□ -1.57
Clp1Q99LI9 Snora30-201ENSMUST00000083325 130 ntBASIC5.24□□□□□ -1.57
Clp1Q99LI9 Gm23875-201ENSMUST00000083711 318 ntBASIC5.24□□□□□ -1.57
Clp1Q99LI9 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Clp1Q99LI9 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
Clp1Q99LI9 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 99.5 ms