Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Lims1Q99JW4 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Lims1Q99JW4 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Lims1Q99JW4 Gm4166-201ENSMUST00000220893 2996 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Lims1Q99JW4 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Lims1Q99JW4 Olfr1317-204ENSMUST00000216988 2488 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Lims1Q99JW4 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Lims1Q99JW4 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Lims1Q99JW4 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Lims1Q99JW4 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Lims1Q99JW4 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Lims1Q99JW4 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Lims1Q99JW4 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Lims1Q99JW4 Gm15215-201ENSMUST00000117773 489 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 Gm13239-201ENSMUST00000119920 637 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 Gm11582-201ENSMUST00000121041 236 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 Gm12815-201ENSMUST00000121737 135 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 Mir1946a-201ENSMUST00000158360 134 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 Gm25643-201ENSMUST00000158874 103 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 Gm9830-201ENSMUST00000178509 357 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Lims1Q99JW4 Gm25939-201ENSMUST00000179876 191 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 Mir7031-201ENSMUST00000183860 65 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 Gm9320-201ENSMUST00000184151 473 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 Gm29475-201ENSMUST00000190767 312 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 Ighv12-2-201ENSMUST00000191949 362 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 Gm37636-201ENSMUST00000193583 359 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 Gm45032-201ENSMUST00000205375 520 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC4.33□□□□□ -1.72
Lims1Q99JW4 Gm19126-201ENSMUST00000207896 509 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.33□□□□□ -1.72
Lims1Q99JW4 AC164161.1-201ENSMUST00000214076 639 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 Gm46389-201ENSMUST00000223199 392 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 AC112935.1-201ENSMUST00000227603 250 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 Gm2710-201ENSMUST00000073196 603 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 Gm23626-201ENSMUST00000082458 133 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 Snora52-201ENSMUST00000082732 137 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 Gm23451-201ENSMUST00000083328 122 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 Mir17-201ENSMUST00000083574 84 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Lims1Q99JW4 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
Lims1Q99JW4 Gm37588-201ENSMUST00000195024 2496 ntBASIC4.33□□□□□ -1.72
Lims1Q99JW4 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
Lims1Q99JW4 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Lims1Q99JW4 Olfr106-ps-202ENSMUST00000214704 1791 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Lims1Q99JW4 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Lims1Q99JW4 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.32□□□□□ -1.72
Lims1Q99JW4 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Lims1Q99JW4 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Lims1Q99JW4 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Lims1Q99JW4 Vmn1r6-205ENSMUST00000227631 7805 ntAPPRIS ALT2 BASIC4.32□□□□□ -1.72
Lims1Q99JW4 Mir92b-201ENSMUST00000102300 83 ntBASIC4.32□□□□□ -1.72
Lims1Q99JW4 Gm14806-201ENSMUST00000116606 2110 ntBASIC4.32□□□□□ -1.72
Lims1Q99JW4 Gm12805-201ENSMUST00000117305 1048 ntBASIC4.32□□□□□ -1.72
Lims1Q99JW4 Gm14101-201ENSMUST00000121502 473 ntBASIC4.32□□□□□ -1.72
Lims1Q99JW4 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC4.32□□□□□ -1.72
Lims1Q99JW4 Gm25361-201ENSMUST00000179358 76 ntBASIC4.32□□□□□ -1.72
Lims1Q99JW4 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Lims1Q99JW4 Gm27492-201ENSMUST00000185194 187 ntBASIC4.32□□□□□ -1.72
Lims1Q99JW4 Gm28097-201ENSMUST00000187333 366 ntBASIC4.32□□□□□ -1.72
Lims1Q99JW4 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC4.32□□□□□ -1.72
Lims1Q99JW4 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC4.32□□□□□ -1.72
Lims1Q99JW4 Gm9722-201ENSMUST00000194568 802 ntBASIC4.32□□□□□ -1.72
Lims1Q99JW4 Gm9238-201ENSMUST00000196181 329 ntBASIC4.32□□□□□ -1.72
Lims1Q99JW4 Gm44419-201ENSMUST00000203338 229 ntBASIC4.32□□□□□ -1.72
Lims1Q99JW4 Gm8132-201ENSMUST00000204938 640 ntBASIC4.32□□□□□ -1.72
Lims1Q99JW4 Gm18306-201ENSMUST00000207338 569 ntBASIC4.32□□□□□ -1.72
Lims1Q99JW4 Gm45252-201ENSMUST00000211579 397 ntBASIC4.32□□□□□ -1.72
Lims1Q99JW4 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC4.32□□□□□ -1.72
Lims1Q99JW4 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC4.32□□□□□ -1.72
Lims1Q99JW4 AC167229.1-201ENSMUST00000220057 469 ntBASIC4.32□□□□□ -1.72
Lims1Q99JW4 Gm18442-201ENSMUST00000220925 639 ntBASIC4.32□□□□□ -1.72
Lims1Q99JW4 AC090496.1-201ENSMUST00000226020 260 ntBASIC4.32□□□□□ -1.72
Lims1Q99JW4 AC100733.1-201ENSMUST00000228494 407 ntBASIC4.32□□□□□ -1.72
Lims1Q99JW4 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Lims1Q99JW4 Gm25147-201ENSMUST00000083030 105 ntBASIC4.32□□□□□ -1.72
Lims1Q99JW4 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.32□□□□□ -1.72
Lims1Q99JW4 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Lims1Q99JW4 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Lims1Q99JW4 Stag2-201ENSMUST00000069619 5825 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Lims1Q99JW4 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Lims1Q99JW4 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC4.32□□□□□ -1.72
Lims1Q99JW4 Olfr685-203ENSMUST00000214712 3326 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
Lims1Q99JW4 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
Lims1Q99JW4 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
Lims1Q99JW4 Gm43326-201ENSMUST00000198459 1638 ntBASIC4.32□□□□□ -1.72
Lims1Q99JW4 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Lims1Q99JW4 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
Lims1Q99JW4 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Lims1Q99JW4 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Lims1Q99JW4 Olfr876-203ENSMUST00000215287 4474 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Lims1Q99JW4 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC4.31□□□□□ -1.72
Lims1Q99JW4 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms