Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm6988-201ENSMUST00000222676 375 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 AC147633.1-201ENSMUST00000225134 259 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Snora23-201ENSMUST00000082517 184 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Mir133b-201ENSMUST00000083546 119 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Mir218-2-201ENSMUST00000083649 110 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Gm21119-201ENSMUST00000178438 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Neat1-201ENSMUST00000173672 20771 ntBASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Scaf4Q6PFF0 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Vmn2r39-201ENSMUST00000174388 3577 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm24640-201ENSMUST00000116949 126 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm22626-201ENSMUST00000116990 126 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm13122-201ENSMUST00000118380 453 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm12311-201ENSMUST00000118803 374 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm14521-201ENSMUST00000119545 350 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm11582-201ENSMUST00000121041 236 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm14287-201ENSMUST00000121060 117 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm8289-201ENSMUST00000144814 1182 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm24909-201ENSMUST00000157290 280 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm24675-201ENSMUST00000158757 259 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm10319-202ENSMUST00000159439 846 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm21842-201ENSMUST00000177552 498 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm21626-201ENSMUST00000177791 498 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm21562-201ENSMUST00000177888 498 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm21539-201ENSMUST00000177925 498 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm21599-201ENSMUST00000178249 498 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm21914-201ENSMUST00000178452 498 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm21723-201ENSMUST00000178692 498 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm21916-201ENSMUST00000178771 498 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm21801-201ENSMUST00000178865 498 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm21633-201ENSMUST00000178941 498 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm24761-201ENSMUST00000179589 127 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm21821-201ENSMUST00000179646 498 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm24488-201ENSMUST00000179934 127 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm25701-201ENSMUST00000179988 127 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm21588-201ENSMUST00000180074 498 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm21780-201ENSMUST00000180128 498 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm21572-201ENSMUST00000180134 498 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm21529-201ENSMUST00000180175 498 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm26431-201ENSMUST00000180199 127 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm19427-201ENSMUST00000183619 208 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm29370-202ENSMUST00000187476 499 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Ighv1-40-201ENSMUST00000194231 345 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm44609-201ENSMUST00000207157 460 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm23330-201ENSMUST00000082660 164 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm26128-201ENSMUST00000083170 110 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm26263-201ENSMUST00000083281 164 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm23456-201ENSMUST00000083335 137 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm22740-201ENSMUST00000083439 109 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
Scaf4Q6PFF0 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm44321-201ENSMUST00000204262 2855 ntBASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm13451-201ENSMUST00000117649 592 ntBASIC4.56□□□□□ -1.68
Scaf4Q6PFF0 Gm13386-201ENSMUST00000117677 124 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms