Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm5384-201ENSMUST00000120313 463 ntBASIC2.08□□□□□ -2.08
Trav6d-4Q5R1I0 Gm16533-201ENSMUST00000140035 228 ntBASIC2.08□□□□□ -2.08
Trav6d-4Q5R1I0 Gm24771-201ENSMUST00000158508 137 ntBASIC2.08□□□□□ -2.08
Trav6d-4Q5R1I0 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
Trav6d-4Q5R1I0 Gm25198-201ENSMUST00000178574 110 ntBASIC2.08□□□□□ -2.08
Trav6d-4Q5R1I0 Gm19694-201ENSMUST00000192364 505 ntBASIC2.08□□□□□ -2.08
Trav6d-4Q5R1I0 Gm30341-201ENSMUST00000194363 289 ntBASIC2.08□□□□□ -2.08
Trav6d-4Q5R1I0 Gm43115-201ENSMUST00000196244 160 ntBASIC2.08□□□□□ -2.08
Trav6d-4Q5R1I0 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
Trav6d-4Q5R1I0 Gm42593-201ENSMUST00000198469 377 ntBASIC2.08□□□□□ -2.08
Trav6d-4Q5R1I0 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC2.08□□□□□ -2.08
Trav6d-4Q5R1I0 Gm44161-201ENSMUST00000203532 253 ntBASIC2.08□□□□□ -2.08
Trav6d-4Q5R1I0 AC160016.1-201ENSMUST00000215589 448 ntBASIC2.08□□□□□ -2.08
Trav6d-4Q5R1I0 AC073947.1-201ENSMUST00000216991 649 ntBASIC2.08□□□□□ -2.08
Trav6d-4Q5R1I0 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC2.08□□□□□ -2.08
Trav6d-4Q5R1I0 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.08□□□□□ -2.08
Trav6d-4Q5R1I0 Gm4928-201ENSMUST00000219622 850 ntBASIC2.08□□□□□ -2.08
Trav6d-4Q5R1I0 Gm17872-201ENSMUST00000222550 532 ntBASIC2.08□□□□□ -2.08
Trav6d-4Q5R1I0 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Trav6d-4Q5R1I0 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC2.08□□□□□ -2.08
Trav6d-4Q5R1I0 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Trav6d-4Q5R1I0 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.08□□□□□ -2.08
Trav6d-4Q5R1I0 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Trav6d-4Q5R1I0 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Trav6d-4Q5R1I0 Gm42483-201ENSMUST00000197556 1742 ntBASIC2.08□□□□□ -2.08
Trav6d-4Q5R1I0 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Trav6d-4Q5R1I0 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trav6d-4Q5R1I0 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
Trav6d-4Q5R1I0 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Trav6d-4Q5R1I0 Gm23803-201ENSMUST00000104610 132 ntBASIC2.07□□□□□ -2.08
Trav6d-4Q5R1I0 Gm14537-201ENSMUST00000117464 599 ntBASIC2.07□□□□□ -2.08
Trav6d-4Q5R1I0 Gm13756-201ENSMUST00000117618 222 ntBASIC2.07□□□□□ -2.08
Trav6d-4Q5R1I0 Gm14593-201ENSMUST00000119948 294 ntBASIC2.07□□□□□ -2.08
Trav6d-4Q5R1I0 Gm11414-201ENSMUST00000121795 263 ntBASIC2.07□□□□□ -2.08
Trav6d-4Q5R1I0 Gm14804-201ENSMUST00000122322 508 ntBASIC2.07□□□□□ -2.08
Trav6d-4Q5R1I0 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Trav6d-4Q5R1I0 Gm25866-201ENSMUST00000158245 112 ntBASIC2.07□□□□□ -2.08
Trav6d-4Q5R1I0 Gm24212-201ENSMUST00000158258 132 ntBASIC2.07□□□□□ -2.08
Trav6d-4Q5R1I0 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trav6d-4Q5R1I0 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC2.07□□□□□ -2.08
Trav6d-4Q5R1I0 Mir3075-201ENSMUST00000175340 85 ntBASIC2.07□□□□□ -2.08
Trav6d-4Q5R1I0 Gm27527-201ENSMUST00000183903 99 ntBASIC2.07□□□□□ -2.08
Trav6d-4Q5R1I0 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Trav6d-4Q5R1I0 Gm19177-201ENSMUST00000204520 613 ntBASIC2.07□□□□□ -2.08
Trav6d-4Q5R1I0 Gm45474-201ENSMUST00000209471 408 ntBASIC2.07□□□□□ -2.08
Trav6d-4Q5R1I0 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.07□□□□□ -2.08
Trav6d-4Q5R1I0 AC117202.3-201ENSMUST00000228532 310 ntBASIC2.07□□□□□ -2.08
Trav6d-4Q5R1I0 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trav6d-4Q5R1I0 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Trav6d-4Q5R1I0 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
Trav6d-4Q5R1I0 AC169038.1-201ENSMUST00000227378 1352 ntBASIC2.07□□□□□ -2.08
Trav6d-4Q5R1I0 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.07□□□□□ -2.08
Trav6d-4Q5R1I0 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Gm6757-201ENSMUST00000189810 1706 ntBASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Gm22752-201ENSMUST00000102083 109 ntBASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Gm24120-201ENSMUST00000103978 129 ntBASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Gm24274-201ENSMUST00000116787 124 ntBASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Gm8580-201ENSMUST00000160295 464 ntBASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Mir6363-201ENSMUST00000184880 114 ntBASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Mir7062-201ENSMUST00000185038 66 ntBASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Gm29658-201ENSMUST00000185404 230 ntBASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Gm38075-201ENSMUST00000191979 920 ntBASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Gm38311-201ENSMUST00000192945 165 ntBASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Gm22897-201ENSMUST00000197860 128 ntBASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Gm42828-201ENSMUST00000199669 469 ntBASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Rab5a-ps-201ENSMUST00000203252 653 ntBASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Gm6796-201ENSMUST00000211919 243 ntBASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Gm18871-201ENSMUST00000218655 745 ntBASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Gm46234-201ENSMUST00000218702 259 ntBASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Gm34983-201ENSMUST00000219484 396 ntTSL 3 BASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Gm9628-201ENSMUST00000222169 725 ntBASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Mir127-201ENSMUST00000093568 70 ntBASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Gm18491-201ENSMUST00000192492 1594 ntBASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Trav6d-4Q5R1I0 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.05□□□□□ -2.08
Trav6d-4Q5R1I0 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Trav6d-4Q5R1I0 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.05□□□□□ -2.08
Trav6d-4Q5R1I0 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.05□□□□□ -2.08
Trav6d-4Q5R1I0 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trav6d-4Q5R1I0 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Trav6d-4Q5R1I0 Gm9427-201ENSMUST00000116187 651 ntBASIC2.05□□□□□ -2.08
Trav6d-4Q5R1I0 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC2.05□□□□□ -2.08
Trav6d-4Q5R1I0 Gm14939-201ENSMUST00000120347 680 ntBASIC2.05□□□□□ -2.08
Trav6d-4Q5R1I0 Gm23889-201ENSMUST00000122689 104 ntBASIC2.05□□□□□ -2.08
Trav6d-4Q5R1I0 Gm3757-201ENSMUST00000125878 675 ntBASIC2.05□□□□□ -2.08
Trav6d-4Q5R1I0 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.05□□□□□ -2.08
Trav6d-4Q5R1I0 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trav6d-4Q5R1I0 Gm15974-201ENSMUST00000159103 531 ntBASIC2.05□□□□□ -2.08
Trav6d-4Q5R1I0 Gm7247-201ENSMUST00000162998 1157 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Trav6d-4Q5R1I0 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Trav6d-4Q5R1I0 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms