Protein–RNA interactions for Protein: Q3U827

Rnf180, E3 ubiquitin-protein ligase RNF180, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf180Q3U827 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
Rnf180Q3U827 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Rnf180Q3U827 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Rnf180Q3U827 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Rnf180Q3U827 Gm24273-201ENSMUST00000102332 164 ntBASIC4.95□□□□□ -1.62
Rnf180Q3U827 Gm25765-201ENSMUST00000104100 132 ntBASIC4.95□□□□□ -1.62
Rnf180Q3U827 Gm13806-201ENSMUST00000117822 325 ntBASIC4.95□□□□□ -1.62
Rnf180Q3U827 Gm15166-201ENSMUST00000120790 385 ntBASIC4.95□□□□□ -1.62
Rnf180Q3U827 Gm11254-201ENSMUST00000122368 653 ntBASIC4.95□□□□□ -1.62
Rnf180Q3U827 n-R5s68-201ENSMUST00000122639 82 ntBASIC4.95□□□□□ -1.62
Rnf180Q3U827 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC4.95□□□□□ -1.62
Rnf180Q3U827 Gm22491-201ENSMUST00000157190 102 ntBASIC4.95□□□□□ -1.62
Rnf180Q3U827 Gm24690-201ENSMUST00000157759 97 ntBASIC4.95□□□□□ -1.62
Rnf180Q3U827 Gm2389-201ENSMUST00000160487 189 ntBASIC4.95□□□□□ -1.62
Rnf180Q3U827 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Rnf180Q3U827 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Rnf180Q3U827 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC4.95□□□□□ -1.62
Rnf180Q3U827 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC4.95□□□□□ -1.62
Rnf180Q3U827 Gm26746-201ENSMUST00000181722 487 ntBASIC4.95□□□□□ -1.62
Rnf180Q3U827 Gm24949-201ENSMUST00000183609 215 ntBASIC4.95□□□□□ -1.62
Rnf180Q3U827 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC4.95□□□□□ -1.62
Rnf180Q3U827 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC4.95□□□□□ -1.62
Rnf180Q3U827 Gm37300-201ENSMUST00000193327 280 ntBASIC4.95□□□□□ -1.62
Rnf180Q3U827 Trbv8-201ENSMUST00000194020 285 ntBASIC4.95□□□□□ -1.62
Rnf180Q3U827 Gm38080-201ENSMUST00000194035 268 ntBASIC4.95□□□□□ -1.62
Rnf180Q3U827 Gm43975-201ENSMUST00000203023 481 ntBASIC4.95□□□□□ -1.62
Rnf180Q3U827 Gm45023-201ENSMUST00000207951 379 ntBASIC4.95□□□□□ -1.62
Rnf180Q3U827 Gm7198-201ENSMUST00000219635 1074 ntBASIC4.95□□□□□ -1.62
Rnf180Q3U827 Gm35558-203ENSMUST00000222264 204 ntBASIC4.95□□□□□ -1.62
Rnf180Q3U827 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.95□□□□□ -1.62
Rnf180Q3U827 AC192333.1-201ENSMUST00000224573 376 ntBASIC4.95□□□□□ -1.62
Rnf180Q3U827 AC144628.2-201ENSMUST00000227374 352 ntBASIC4.95□□□□□ -1.62
Rnf180Q3U827 Ear14-201ENSMUST00000049559 468 ntBASIC4.95□□□□□ -1.62
Rnf180Q3U827 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Rnf180Q3U827 Gm23378-201ENSMUST00000082942 107 ntBASIC4.95□□□□□ -1.62
Rnf180Q3U827 Gm25008-201ENSMUST00000083809 81 ntBASIC4.95□□□□□ -1.62
Rnf180Q3U827 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
Rnf180Q3U827 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Rnf180Q3U827 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.95□□□□□ -1.62
Rnf180Q3U827 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC4.95□□□□□ -1.62
Rnf180Q3U827 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Rnf180Q3U827 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Rnf180Q3U827 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Rnf180Q3U827 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC4.94□□□□□ -1.62
Rnf180Q3U827 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Rnf180Q3U827 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Rnf180Q3U827 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Rnf180Q3U827 Gm5287-201ENSMUST00000120666 598 ntBASIC4.94□□□□□ -1.62
Rnf180Q3U827 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC4.94□□□□□ -1.62
Rnf180Q3U827 Gm11403-201ENSMUST00000122195 369 ntBASIC4.94□□□□□ -1.62
Rnf180Q3U827 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC4.94□□□□□ -1.62
Rnf180Q3U827 Ear-ps3-201ENSMUST00000168308 445 ntBASIC4.94□□□□□ -1.62
Rnf180Q3U827 Gm17919-201ENSMUST00000173344 312 ntBASIC4.94□□□□□ -1.62
Rnf180Q3U827 Gm8649-201ENSMUST00000181799 233 ntBASIC4.94□□□□□ -1.62
Rnf180Q3U827 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Rnf180Q3U827 Gm28785-201ENSMUST00000187478 379 ntBASIC4.94□□□□□ -1.62
Rnf180Q3U827 Gm5731-201ENSMUST00000190969 481 ntBASIC4.94□□□□□ -1.62
Rnf180Q3U827 Gm43652-201ENSMUST00000196219 675 ntBASIC4.94□□□□□ -1.62
Rnf180Q3U827 Gm5001-201ENSMUST00000204361 331 ntBASIC4.94□□□□□ -1.62
Rnf180Q3U827 Gm44092-201ENSMUST00000204470 258 ntBASIC4.94□□□□□ -1.62
Rnf180Q3U827 AL669916.3-201ENSMUST00000213855 94 ntBASIC4.94□□□□□ -1.62
Rnf180Q3U827 AL669916.6-201ENSMUST00000214610 94 ntBASIC4.94□□□□□ -1.62
Rnf180Q3U827 AL669916.4-201ENSMUST00000215976 94 ntBASIC4.94□□□□□ -1.62
Rnf180Q3U827 AL669916.1-201ENSMUST00000217640 94 ntBASIC4.94□□□□□ -1.62
Rnf180Q3U827 AC116589.3-202ENSMUST00000221770 649 ntBASIC4.94□□□□□ -1.62
Rnf180Q3U827 AC116589.6-201ENSMUST00000222252 649 ntBASIC4.94□□□□□ -1.62
Rnf180Q3U827 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Rnf180Q3U827 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Rnf180Q3U827 Gm43466-201ENSMUST00000197836 5214 ntBASIC4.94□□□□□ -1.62
Rnf180Q3U827 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC4.94□□□□□ -1.62
Rnf180Q3U827 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4.94□□□□□ -1.62
Rnf180Q3U827 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC4.94□□□□□ -1.62
Rnf180Q3U827 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Rnf180Q3U827 Gm43320-201ENSMUST00000196047 2916 ntBASIC4.93□□□□□ -1.62
Rnf180Q3U827 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Rnf180Q3U827 Gm37903-201ENSMUST00000192122 2381 ntBASIC4.93□□□□□ -1.62
Rnf180Q3U827 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Rnf180Q3U827 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Rnf180Q3U827 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.93□□□□□ -1.62
Rnf180Q3U827 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
Rnf180Q3U827 Gm14669-201ENSMUST00000118841 250 ntBASIC4.93□□□□□ -1.62
Rnf180Q3U827 Gm6373-201ENSMUST00000121026 360 ntBASIC4.93□□□□□ -1.62
Rnf180Q3U827 Mir1898-201ENSMUST00000122643 83 ntBASIC4.93□□□□□ -1.62
Rnf180Q3U827 Gm23206-201ENSMUST00000122720 184 ntBASIC4.93□□□□□ -1.62
Rnf180Q3U827 Gm16157-201ENSMUST00000124813 534 ntTSL 3 BASIC4.93□□□□□ -1.62
Rnf180Q3U827 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Rnf180Q3U827 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.93□□□□□ -1.62
Rnf180Q3U827 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC4.93□□□□□ -1.62
Rnf180Q3U827 Gm25436-201ENSMUST00000158275 145 ntBASIC4.93□□□□□ -1.62
Rnf180Q3U827 Gm27660-201ENSMUST00000184028 208 ntBASIC4.93□□□□□ -1.62
Rnf180Q3U827 Gm27190-201ENSMUST00000184890 542 ntBASIC4.93□□□□□ -1.62
Rnf180Q3U827 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC4.93□□□□□ -1.62
Rnf180Q3U827 Gm44393-201ENSMUST00000197418 138 ntBASIC4.93□□□□□ -1.62
Rnf180Q3U827 Gm19418-201ENSMUST00000197436 580 ntBASIC4.93□□□□□ -1.62
Rnf180Q3U827 Gm18482-201ENSMUST00000202405 760 ntBASIC4.93□□□□□ -1.62
Rnf180Q3U827 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC4.93□□□□□ -1.62
Rnf180Q3U827 AC154640.2-201ENSMUST00000226324 472 ntBASIC4.93□□□□□ -1.62
Rnf180Q3U827 Gm25481-201ENSMUST00000083221 158 ntBASIC4.93□□□□□ -1.62
Rnf180Q3U827 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC4.93□□□□□ -1.62
Rnf180Q3U827 Gm44789-201ENSMUST00000207195 3101 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms