Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm38260-201ENSMUST00000193573 3995 ntBASIC5.19□□□□□ -1.58
Col6a1Q04857 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a1Q04857 Gria2-201ENSMUST00000075316 10371 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a1Q04857 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Col6a1Q04857 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Col6a1Q04857 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.19□□□□□ -1.58
Col6a1Q04857 Gm7988-201ENSMUST00000196623 2297 ntBASIC5.18□□□□□ -1.58
Col6a1Q04857 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a1Q04857 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a1Q04857 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a1Q04857 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a1Q04857 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC5.18□□□□□ -1.58
Col6a1Q04857 Gm14107-201ENSMUST00000117774 330 ntBASIC5.18□□□□□ -1.58
Col6a1Q04857 Gm12039-201ENSMUST00000118219 180 ntBASIC5.18□□□□□ -1.58
Col6a1Q04857 Gm12820-201ENSMUST00000119233 342 ntBASIC5.18□□□□□ -1.58
Col6a1Q04857 Gm12486-201ENSMUST00000120887 541 ntBASIC5.18□□□□□ -1.58
Col6a1Q04857 Gm14845-201ENSMUST00000121259 306 ntBASIC5.18□□□□□ -1.58
Col6a1Q04857 Gm11931-201ENSMUST00000121630 447 ntBASIC5.18□□□□□ -1.58
Col6a1Q04857 Gm23789-201ENSMUST00000122536 301 ntBASIC5.18□□□□□ -1.58
Col6a1Q04857 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC5.18□□□□□ -1.58
Col6a1Q04857 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC5.18□□□□□ -1.58
Col6a1Q04857 Gm26490-201ENSMUST00000157879 140 ntBASIC5.18□□□□□ -1.58
Col6a1Q04857 Gm23411-201ENSMUST00000157988 62 ntBASIC5.18□□□□□ -1.58
Col6a1Q04857 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col6a1Q04857 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col6a1Q04857 Gm26219-201ENSMUST00000175216 71 ntBASIC5.18□□□□□ -1.58
Col6a1Q04857 Gm23864-201ENSMUST00000177607 107 ntBASIC5.18□□□□□ -1.58
Col6a1Q04857 Mir6418-201ENSMUST00000185075 115 ntBASIC5.18□□□□□ -1.58
Col6a1Q04857 Gm42672-201ENSMUST00000197821 352 ntBASIC5.18□□□□□ -1.58
Col6a1Q04857 Tprkb-208ENSMUST00000200680 814 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Col6a1Q04857 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC5.18□□□□□ -1.58
Col6a1Q04857 Gm19326-201ENSMUST00000219818 326 ntBASIC5.18□□□□□ -1.58
Col6a1Q04857 CR974429.1-201ENSMUST00000220877 827 ntBASIC5.18□□□□□ -1.58
Col6a1Q04857 AC129308.2-201ENSMUST00000224588 789 ntBASIC5.18□□□□□ -1.58
Col6a1Q04857 AC090496.1-201ENSMUST00000226020 260 ntBASIC5.18□□□□□ -1.58
Col6a1Q04857 AC155167.1-201ENSMUST00000228931 614 ntBASIC5.18□□□□□ -1.58
Col6a1Q04857 Gm25134-201ENSMUST00000082646 160 ntBASIC5.18□□□□□ -1.58
Col6a1Q04857 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col6a1Q04857 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a1Q04857 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col6a1Q04857 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Col6a1Q04857 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Col6a1Q04857 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Col6a1Q04857 Gm43011-201ENSMUST00000197897 4433 ntBASIC5.17□□□□□ -1.58
Col6a1Q04857 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a1Q04857 Ank2-207ENSMUST00000182064 12413 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Col6a1Q04857 Stard9-207ENSMUST00000180041 15102 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col6a1Q04857 Olfr495-202ENSMUST00000215215 2460 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col6a1Q04857 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Col6a1Q04857 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col6a1Q04857 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a1Q04857 Prune2-201ENSMUST00000087689 12512 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Col6a1Q04857 Gm37764-201ENSMUST00000194664 2150 ntBASIC5.17□□□□□ -1.58
Col6a1Q04857 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC5.17□□□□□ -1.58
Col6a1Q04857 Gm24792-201ENSMUST00000104286 128 ntBASIC5.17□□□□□ -1.58
Col6a1Q04857 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC5.17□□□□□ -1.58
Col6a1Q04857 Fam107b-205ENSMUST00000115055 515 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Col6a1Q04857 Gm15012-201ENSMUST00000119176 106 ntBASIC5.17□□□□□ -1.58
Col6a1Q04857 Gm7219-201ENSMUST00000119619 297 ntBASIC5.17□□□□□ -1.58
Col6a1Q04857 Gm12704-201ENSMUST00000119789 464 ntBASIC5.17□□□□□ -1.58
Col6a1Q04857 Gm12691-201ENSMUST00000120186 456 ntBASIC5.17□□□□□ -1.58
Col6a1Q04857 Gm24504-201ENSMUST00000157679 100 ntBASIC5.17□□□□□ -1.58
Col6a1Q04857 Gm22536-201ENSMUST00000158171 134 ntBASIC5.17□□□□□ -1.58
Col6a1Q04857 Gm23258-201ENSMUST00000158319 106 ntBASIC5.17□□□□□ -1.58
Col6a1Q04857 Gm25520-201ENSMUST00000158389 118 ntBASIC5.17□□□□□ -1.58
Col6a1Q04857 Gm24618-201ENSMUST00000177718 94 ntBASIC5.17□□□□□ -1.58
Col6a1Q04857 Gm23953-201ENSMUST00000178214 94 ntBASIC5.17□□□□□ -1.58
Col6a1Q04857 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Col6a1Q04857 Gm26332-201ENSMUST00000179813 94 ntBASIC5.17□□□□□ -1.58
Col6a1Q04857 Gm22863-201ENSMUST00000180265 94 ntBASIC5.17□□□□□ -1.58
Col6a1Q04857 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC5.17□□□□□ -1.58
Col6a1Q04857 Gm27490-201ENSMUST00000184754 128 ntBASIC5.17□□□□□ -1.58
Col6a1Q04857 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a1Q04857 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC5.17□□□□□ -1.58
Col6a1Q04857 CT572985.2-201ENSMUST00000220496 211 ntBASIC5.17□□□□□ -1.58
Col6a1Q04857 AC122341.1-201ENSMUST00000227291 560 ntBASIC5.17□□□□□ -1.58
Col6a1Q04857 AC112935.1-201ENSMUST00000227603 250 ntBASIC5.17□□□□□ -1.58
Col6a1Q04857 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Col6a1Q04857 Olfr1458-201ENSMUST00000076729 906 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Col6a1Q04857 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Col6a1Q04857 Gm23412-201ENSMUST00000083017 107 ntBASIC5.17□□□□□ -1.58
Col6a1Q04857 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a1Q04857 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a1Q04857 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.17□□□□□ -1.58
Col6a1Q04857 Vmn1r87-203ENSMUST00000227443 5319 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Col6a1Q04857 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Col6a1Q04857 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a1Q04857 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Col6a1Q04857 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Col6a1Q04857 Gm21379-201ENSMUST00000179772 1955 ntBASIC5.16□□□□□ -1.58
Col6a1Q04857 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a1Q04857 Rfc1-202ENSMUST00000203471 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a1Q04857 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a1Q04857 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Col6a1Q04857 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Col6a1Q04857 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.16□□□□□ -1.58
Col6a1Q04857 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
Col6a1Q04857 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Col6a1Q04857 AC154227.1-201ENSMUST00000228809 2467 ntBASIC5.16□□□□□ -1.58
Col6a1Q04857 AI987944-202ENSMUST00000205338 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms