Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Lima1Q9ERG0 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Gm13803-201ENSMUST00000117547 489 ntBASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Gm16383-201ENSMUST00000118122 232 ntBASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Gm6121-201ENSMUST00000119231 924 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Gm6071-201ENSMUST00000119561 440 ntBASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Gm6591-201ENSMUST00000121063 434 ntBASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Gm14589-201ENSMUST00000121640 727 ntBASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Gm5958-201ENSMUST00000147698 297 ntBASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Gm24734-201ENSMUST00000158860 262 ntBASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Gm24520-201ENSMUST00000179510 110 ntBASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Gm7870-201ENSMUST00000184467 616 ntBASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Gm37616-201ENSMUST00000193974 322 ntBASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Gm7897-201ENSMUST00000193981 554 ntBASIC2.81□□□□□ -1.96
Lima1Q9ERG0 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Gm43345-201ENSMUST00000199484 269 ntBASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Gm44594-201ENSMUST00000208982 407 ntBASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Gm45513-201ENSMUST00000210228 376 ntBASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Gm18892-201ENSMUST00000217628 881 ntBASIC2.81□□□□□ -1.96
Lima1Q9ERG0 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Il1f8-201ENSMUST00000028363 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
Lima1Q9ERG0 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Gm23297-201ENSMUST00000083184 127 ntBASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Lima1Q9ERG0 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Lima1Q9ERG0 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC2.8□□□□□ -1.96
Lima1Q9ERG0 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Gm13329-201ENSMUST00000117063 265 ntBASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Gm12392-201ENSMUST00000118014 938 ntBASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Gm16445-201ENSMUST00000120399 714 ntBASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Gm16458-201ENSMUST00000121428 502 ntBASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Gm23792-201ENSMUST00000122557 93 ntBASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Gm23325-201ENSMUST00000157422 129 ntBASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Gm8338-201ENSMUST00000163928 363 ntBASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Gm27698-201ENSMUST00000184060 249 ntBASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Gm26801-202ENSMUST00000193187 610 ntTSL 3 BASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Gm43521-201ENSMUST00000197838 255 ntBASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Gm43107-201ENSMUST00000198729 255 ntBASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Gm7652-201ENSMUST00000200440 1151 ntBASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Gm44232-201ENSMUST00000204537 225 ntBASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Gm44688-201ENSMUST00000209083 537 ntBASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Gm7751-201ENSMUST00000212868 709 ntBASIC2.8□□□□□ -1.96
Lima1Q9ERG0 AC122301.3-201ENSMUST00000217707 716 ntTSL 5 BASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Lima1Q9ERG0 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Lima1Q9ERG0 Gm6429-201ENSMUST00000117144 475 ntBASIC2.79□□□□□ -1.96
Lima1Q9ERG0 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Lima1Q9ERG0 Gm11285-201ENSMUST00000118443 322 ntBASIC2.79□□□□□ -1.96
Lima1Q9ERG0 Gm11693-201ENSMUST00000119625 565 ntBASIC2.79□□□□□ -1.96
Lima1Q9ERG0 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Lima1Q9ERG0 Gm11229-201ENSMUST00000121993 437 ntBASIC2.79□□□□□ -1.96
Lima1Q9ERG0 Defa-ps12-201ENSMUST00000122353 193 ntBASIC2.79□□□□□ -1.96
Lima1Q9ERG0 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.79□□□□□ -1.96
Lima1Q9ERG0 Gm22792-201ENSMUST00000157225 133 ntBASIC2.79□□□□□ -1.96
Lima1Q9ERG0 Gm24190-201ENSMUST00000157976 216 ntBASIC2.79□□□□□ -1.96
Lima1Q9ERG0 Gm23312-201ENSMUST00000158774 102 ntBASIC2.79□□□□□ -1.96
Lima1Q9ERG0 Gm26991-201ENSMUST00000180950 620 ntBASIC2.79□□□□□ -1.96
Lima1Q9ERG0 Gm19200-201ENSMUST00000182579 1001 ntBASIC2.79□□□□□ -1.96
Lima1Q9ERG0 Gm19257-201ENSMUST00000186121 183 ntBASIC2.79□□□□□ -1.96
Lima1Q9ERG0 Gm29523-201ENSMUST00000191415 699 ntBASIC2.79□□□□□ -1.96
Lima1Q9ERG0 Gm30341-201ENSMUST00000194363 289 ntBASIC2.79□□□□□ -1.96
Lima1Q9ERG0 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Lima1Q9ERG0 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC2.79□□□□□ -1.96
Lima1Q9ERG0 AC123618.1-201ENSMUST00000220174 360 ntBASIC2.79□□□□□ -1.96
Lima1Q9ERG0 AC154576.2-202ENSMUST00000223916 688 ntBASIC2.79□□□□□ -1.96
Lima1Q9ERG0 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Lima1Q9ERG0 AC144819.1-201ENSMUST00000227015 620 ntBASIC2.79□□□□□ -1.96
Lima1Q9ERG0 AC139294.2-201ENSMUST00000227159 285 ntBASIC2.79□□□□□ -1.96
Lima1Q9ERG0 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Lima1Q9ERG0 Mir323-201ENSMUST00000083683 86 ntBASIC2.79□□□□□ -1.96
Lima1Q9ERG0 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC2.79□□□□□ -1.96
Lima1Q9ERG0 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Lima1Q9ERG0 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
Lima1Q9ERG0 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Lima1Q9ERG0 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Lima1Q9ERG0 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms