Protein–RNA interactions for Protein: Q9D5Y1

Ccdc39, Coiled-coil domain-containing protein 39, mousemouse

Predictions only

Length 937 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39Q9D5Y1 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 AC154552.6-201ENSMUST00000221365 1342 ntBASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 Gm25308-201ENSMUST00000104171 158 ntBASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 Gm23175-201ENSMUST00000104371 132 ntBASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 Gm14795-201ENSMUST00000118461 471 ntBASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 Gm15090-201ENSMUST00000118787 1196 ntBASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 Gm15089-201ENSMUST00000122332 1196 ntBASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 Gm7870-201ENSMUST00000184467 616 ntBASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 AC127302.1-201ENSMUST00000215973 1111 ntBASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 AC134596.2-201ENSMUST00000222158 171 ntBASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 LOC667541-201ENSMUST00000223408 278 ntBASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 AC116395.1-201ENSMUST00000225480 1143 ntBASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 CT571256.1-201ENSMUST00000226045 585 ntBASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
Ccdc39Q9D5Y1 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Gm25313-201ENSMUST00000101817 116 ntBASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Gm8569-201ENSMUST00000117630 647 ntBASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Gm12495-201ENSMUST00000119750 447 ntBASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Gm7308-201ENSMUST00000121087 447 ntBASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Gm15116-201ENSMUST00000122248 663 ntBASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Gm17194-201ENSMUST00000164610 348 ntBASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Gm23287-201ENSMUST00000179427 116 ntBASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Gm23143-201ENSMUST00000180137 116 ntBASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Gm28146-201ENSMUST00000185517 701 ntBASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Gm29259-201ENSMUST00000186396 694 ntBASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Gm37428-201ENSMUST00000193886 137 ntBASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Gm44061-201ENSMUST00000203962 1195 ntBASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Gm17911-201ENSMUST00000210806 877 ntBASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 AL929285.1-201ENSMUST00000215522 229 ntBASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Gm46234-201ENSMUST00000218702 259 ntBASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Gm7198-201ENSMUST00000219635 1074 ntBASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Gm9370-201ENSMUST00000222787 609 ntBASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 AC124433.2-201ENSMUST00000223867 291 ntBASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 AC154515.2-201ENSMUST00000226093 406 ntBASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Gm24871-201ENSMUST00000083099 116 ntBASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Rnu5g-201ENSMUST00000093721 116 ntBASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Gm42852-201ENSMUST00000202649 1379 ntBASIC3.74□□□□□ -1.81
Ccdc39Q9D5Y1 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 Zfp711-201ENSMUST00000071814 3817 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 4930440C22Rik-201ENSMUST00000185490 1565 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 Mir291a-201ENSMUST00000104815 82 ntBASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 Mir1198-201ENSMUST00000116995 121 ntBASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 Gm12739-201ENSMUST00000119769 382 ntBASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 Gm4540-201ENSMUST00000170669 429 ntBASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 Gm20824-201ENSMUST00000186739 919 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 Gm37751-201ENSMUST00000192440 1198 ntBASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 Gm45513-201ENSMUST00000210228 376 ntBASIC3.73□□□□□ -1.81
Ccdc39Q9D5Y1 Gm20948-201ENSMUST00000211091 449 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 100.8 ms