Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm8666-201ENSMUST00000117517 292 ntBASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm14299-201ENSMUST00000117586 397 ntBASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm23959-201ENSMUST00000157208 324 ntBASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm23702-201ENSMUST00000158840 130 ntBASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm28779-201ENSMUST00000189678 323 ntBASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm17906-201ENSMUST00000202480 901 ntBASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm45006-201ENSMUST00000206078 690 ntBASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm45146-201ENSMUST00000207108 221 ntBASIC4.62□□□□□ -1.67
Vps53Q8CCB4 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
Vps53Q8CCB4 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Vps53Q8CCB4 AL662807.1-201ENSMUST00000224183 126 ntBASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm7099-201ENSMUST00000080066 554 ntBASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm23614-201ENSMUST00000082598 107 ntBASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm23460-201ENSMUST00000083258 109 ntBASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm37478-201ENSMUST00000193624 3495 ntBASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC4.62□□□□□ -1.67
Vps53Q8CCB4 AC167360.1-201ENSMUST00000222596 2494 ntBASIC4.62□□□□□ -1.67
Vps53Q8CCB4 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Vps53Q8CCB4 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
Vps53Q8CCB4 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Vps53Q8CCB4 Lrrtm2-201ENSMUST00000091636 5665 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Vps53Q8CCB4 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Vps53Q8CCB4 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Vps53Q8CCB4 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Vps53Q8CCB4 Gm13803-201ENSMUST00000117547 489 ntBASIC4.61□□□□□ -1.67
Vps53Q8CCB4 Gm14731-201ENSMUST00000119216 376 ntBASIC4.61□□□□□ -1.67
Vps53Q8CCB4 Gm12335-201ENSMUST00000119738 327 ntBASIC4.61□□□□□ -1.67
Vps53Q8CCB4 Gm15379-201ENSMUST00000121224 648 ntBASIC4.61□□□□□ -1.67
Vps53Q8CCB4 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC4.61□□□□□ -1.67
Vps53Q8CCB4 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Vps53Q8CCB4 Gm25334-201ENSMUST00000158036 110 ntBASIC4.61□□□□□ -1.67
Vps53Q8CCB4 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC4.61□□□□□ -1.67
Vps53Q8CCB4 Gm19203-201ENSMUST00000174049 939 ntBASIC4.61□□□□□ -1.67
Vps53Q8CCB4 Gm36953-201ENSMUST00000195295 268 ntBASIC4.61□□□□□ -1.67
Vps53Q8CCB4 Gm42453-201ENSMUST00000200477 409 ntBASIC4.61□□□□□ -1.67
Vps53Q8CCB4 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
Vps53Q8CCB4 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Vps53Q8CCB4 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Vps53Q8CCB4 Gm19441-201ENSMUST00000221545 330 ntBASIC4.61□□□□□ -1.67
Vps53Q8CCB4 AC187103.4-202ENSMUST00000225091 230 ntBASIC4.61□□□□□ -1.67
Vps53Q8CCB4 AC117588.3-201ENSMUST00000228517 325 ntBASIC4.61□□□□□ -1.67
Vps53Q8CCB4 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Vps53Q8CCB4 Olfr1193-201ENSMUST00000081697 957 ntBASIC4.61□□□□□ -1.67
Vps53Q8CCB4 n-R5s54-201ENSMUST00000083837 112 ntBASIC4.61□□□□□ -1.67
Vps53Q8CCB4 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Vps53Q8CCB4 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
Vps53Q8CCB4 AC147615.2-201ENSMUST00000219876 2154 ntBASIC4.61□□□□□ -1.67
Vps53Q8CCB4 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
Vps53Q8CCB4 AC163660.3-201ENSMUST00000224253 1563 ntBASIC4.61□□□□□ -1.67
Vps53Q8CCB4 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Vps53Q8CCB4 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Vps53Q8CCB4 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Gm23691-201ENSMUST00000101878 107 ntBASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Mir690-201ENSMUST00000102110 109 ntBASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Gm15151-201ENSMUST00000117106 177 ntBASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Gm14517-201ENSMUST00000119040 337 ntBASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Gm16017-201ENSMUST00000119834 208 ntBASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Gm12691-201ENSMUST00000120186 456 ntBASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Gm14591-201ENSMUST00000120407 518 ntBASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Gm15014-201ENSMUST00000120742 258 ntBASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Gm12900-201ENSMUST00000120919 573 ntBASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Mup-ps22-201ENSMUST00000121611 243 ntBASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Gm25572-201ENSMUST00000157527 172 ntBASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Gm22059-201ENSMUST00000157544 104 ntBASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Gm16101-201ENSMUST00000160695 430 ntBASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Gm22307-201ENSMUST00000180019 107 ntBASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Mir6541-201ENSMUST00000183649 110 ntBASIC4.6□□□□□ -1.67
Vps53Q8CCB4 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC4.6□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 162.1 ms